RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 A8MZ25 164 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 PRSS46E5RG02 174 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 WRBO00258 174 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 CCSO14618 274 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 PAX9P55771 341 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 POLR2GP62487 172 aaKnown RBP eCLIP8.34□□□□□ -1.07
VRK3-210ENST00000596121 GAMTQ14353 236 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 SLC16A13Q7RTY0 426 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 NRARPQ7Z6K4 114 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 DEFB125Q8N687 156 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 ZNF431Q8TF32 576 aaPredicted RBP8.34□□□□□ -1.07
VRK3-210ENST00000596121 ACY3Q96HD9 319 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 RHPN1-AS1Q9BWJ2 59 aa8.34□□□□□ -1.07
VRK3-210ENST00000596121 IGKV1D-37A0A075B6S9 117 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 TRAV25A0A0B4J276 109 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 IGHV3-66A0A0C4DH42 116 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 RPS10-NUDT3A0A1W2PQS6 291 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 IFNA4P05014 189 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 SLC25A4P12235 298 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 OR10J1P30954 320 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 IAH1Q2TAA2 248 aaPredicted RBP8.33□□□□□ -1.08
VRK3-210ENST00000596121 FAM90A2PQ658T7 463 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 MZT2BQ6NZ67 158 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 LINC00322Q6ZN03 302 aaPredicted RBP8.33□□□□□ -1.08
VRK3-210ENST00000596121 GTSCR1Q86UQ5 136 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 ZBTB8BQ8NAP8 495 aaPredicted RBP8.33□□□□□ -1.08
VRK3-210ENST00000596121 OR1S2Q8NGQ3 325 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 ST8SIA2Q92186 375 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 CITED4Q96RK1 184 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 NBEAL2Q6ZNJ1 2754 aa8.33□□□□□ -1.08
VRK3-210ENST00000596121 IGKV1OR2-108A0A075B7D4 117 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 RBMY1BA6NDE4 496 aaKnown RBP8.32□□□□□ -1.08
VRK3-210ENST00000596121 RBMY1EA6NEQ0 496 aaKnown RBP8.32□□□□□ -1.08
VRK3-210ENST00000596121 PMS2P5A8MQ11 134 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 H3BP45 60 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 TSPAN4O14817 238 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 MED6O75586 246 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 CCNKO75909 580 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 IFNA21P01568 189 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 RBMY1DP0C7P1 496 aaKnown RBP8.32□□□□□ -1.08
VRK3-210ENST00000596121 GPX4P36969 197 aaPredicted RBP8.32□□□□□ -1.08
VRK3-210ENST00000596121 NKX2-1P43699 371 aaPredicted RBP8.32□□□□□ -1.08
VRK3-210ENST00000596121 ATP5IP56385 69 aaPredicted RBP8.32□□□□□ -1.08
VRK3-210ENST00000596121 YPEL3P61236 119 aaPredicted RBP8.32□□□□□ -1.08
VRK3-210ENST00000596121 SPANXN5Q5MJ07 72 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 ETFRF1Q6IPR1 90 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 RBPMS2Q6ZRY4 209 aaKnown RBP8.32□□□□□ -1.08
VRK3-210ENST00000596121 NOXA1Q86UR1 476 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 C12orf45Q8N5I9 185 aaPredicted RBP8.32□□□□□ -1.08
VRK3-210ENST00000596121 VSIRQ9H7M9 311 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 GSKIPQ9P0R6 139 aa8.32□□□□□ -1.08
VRK3-210ENST00000596121 TRAV30A0A087WSZ9 112 aa8.31□□□□□ -1.08
VRK3-210ENST00000596121 OR11H12B2RN74 326 aa8.31□□□□□ -1.08
VRK3-210ENST00000596121 SSSCA1O60232 199 aa8.31□□□□□ -1.08
VRK3-210ENST00000596121 DFFBO76075 338 aa8.31□□□□□ -1.08
VRK3-210ENST00000596121 MBPP02686 304 aaPredicted RBP8.31□□□□□ -1.08
VRK3-210ENST00000596121 IL5P05113 134 aa8.31□□□□□ -1.08
VRK3-210ENST00000596121 NHLRC4P0CG21 123 aaPredicted RBP8.31□□□□□ -1.08
VRK3-210ENST00000596121 ZNF90Q03938 601 aa8.31□□□□□ -1.08
VRK3-210ENST00000596121 IL15RAQ13261 267 aa8.31□□□□□ -1.08
VRK3-210ENST00000596121 USF2Q15853 346 aaPredicted RBP8.31□□□□□ -1.08
VRK3-210ENST00000596121 HAGHQ16775 308 aa8.31□□□□□ -1.08
VRK3-210ENST00000596121 ODF3L2Q3SX64 289 aa8.31□□□□□ -1.08
VRK3-210ENST00000596121 CIB3Q96Q77 187 aaPredicted RBP8.31□□□□□ -1.08
VRK3-210ENST00000596121 PAIP2BQ9ULR5 123 aaKnown RBP8.31□□□□□ -1.08
VRK3-210ENST00000596121 RCL1Q9Y2P8 373 aaKnown RBP8.31□□□□□ -1.08
VRK3-210ENST00000596121 U3KQE9 123 aa8.31□□□□□ -1.08
VRK3-210ENST00000596121 IGKV3-7A0A075B6H7 116 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 SCGB1D2O95969 90 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 PSG1P11464 419 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 CRYBB3P26998 211 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 ARL16Q0P5N6 197 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 LAMTOR1Q6IAA8 161 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 TMEM182Q6ZP80 229 aaPredicted RBP8.3□□□□□ -1.08
VRK3-210ENST00000596121 TCF24Q7RTU0 167 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 STPG3Q8N7X2 389 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 ENKURQ8TC29 256 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 Q8WTZ3 238 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 SMIM8Q96KF7 97 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 SPAG8Q99932 426 aaPredicted RBP8.3□□□□□ -1.08
VRK3-210ENST00000596121 TM2D3Q9BRN9 247 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 GINS3Q9BRX5 216 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 C11orf1Q9H5F2 150 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 SRD5A3Q9H8P0 318 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 PSENENQ9NZ42 101 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 UBQLN2Q9UHD9 624 aa8.3□□□□□ -1.08
VRK3-210ENST00000596121 FAM25EA8MYX2 175 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 TOMM40O96008 361 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 RD3LP0DJH9 198 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 NPPCP23582 126 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 TFPI2P48307 235 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 RAB11AP62491 216 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 ZNF124Q15973 351 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 TMEM14EPQ6UXP3 125 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 GBGT1Q8N5D6 347 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 FAM24BQ8N5W8 94 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 THAP8Q8NA92 274 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 SLC35E1Q96K37 410 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 TUBA4BQ9H853 241 aa8.29□□□□□ -1.08
VRK3-210ENST00000596121 STRAPQ9Y3F4 350 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms