RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 OR10J1P30954 320 aa12.09□□□□□ -0.47
TRIM28-206ENST00000595974 DHRS2Q13268 280 aa12.09□□□□□ -0.47
TRIM28-206ENST00000595974 TIGITQ495A1 244 aa12.09□□□□□ -0.47
TRIM28-206ENST00000595974 GGNBP1Q5YKI7 109 aa12.09□□□□□ -0.47
TRIM28-206ENST00000595974 LYG2Q86SG7 212 aa12.09□□□□□ -0.47
TRIM28-206ENST00000595974 COQ8AQ8NI60 647 aa12.09□□□□□ -0.47
TRIM28-206ENST00000595974 CIB3Q96Q77 187 aaPredicted RBP12.09□□□□□ -0.47
TRIM28-206ENST00000595974 CCDC32Q9BV29 185 aa12.09□□□□□ -0.47
TRIM28-206ENST00000595974 VSIRQ9H7M9 311 aa12.09□□□□□ -0.47
TRIM28-206ENST00000595974 DNAH7Q8WXX0 4024 aa12.09□□□□□ -0.47
TRIM28-206ENST00000595974 IGHV3OR16-13A0A075B7E8 117 aa12.08□□□□□ -0.48
TRIM28-206ENST00000595974 IGHV3-74A0A0B4J1X5 117 aa12.08□□□□□ -0.48
TRIM28-206ENST00000595974 LYRM1O43325 122 aa12.08□□□□□ -0.48
TRIM28-206ENST00000595974 IFNA4P05014 189 aa12.08□□□□□ -0.48
TRIM28-206ENST00000595974 YPEL3P61236 119 aaPredicted RBP12.08□□□□□ -0.48
TRIM28-206ENST00000595974 ODF3L2Q3SX64 289 aa12.08□□□□□ -0.48
TRIM28-206ENST00000595974 FAM90A2PQ658T7 463 aa12.08□□□□□ -0.48
TRIM28-206ENST00000595974 ST8SIA2Q92186 375 aa12.08□□□□□ -0.48
TRIM28-206ENST00000595974 METTL26Q96S19 204 aa12.08□□□□□ -0.48
TRIM28-206ENST00000595974 GGTLC1Q9BX51 225 aa12.08□□□□□ -0.48
TRIM28-206ENST00000595974 NBEAL2Q6ZNJ1 2754 aa12.08□□□□□ -0.48
TRIM28-206ENST00000595974 A0A1W2PS18 150 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 PLA2G10O15496 165 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 IAPPP10997 89 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 ANXA7P20073 488 aaKnown RBP12.07□□□□□ -0.48
TRIM28-206ENST00000595974 NPPCP23582 126 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 RAB11AP62491 216 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 C4orf46Q504U0 113 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 TCF24Q7RTU0 167 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 Q8WTZ3 238 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 ACY3Q96HD9 319 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 NARS2Q96I59 477 aaKnown RBP12.07□□□□□ -0.48
TRIM28-206ENST00000595974 CITED4Q96RK1 184 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 C20orf85Q9H1P6 137 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 UBQLN2Q9UHD9 624 aa12.07□□□□□ -0.48
TRIM28-206ENST00000595974 LOC102724200A0A096LPH7 203 aaPredicted RBP12.06□□□□□ -0.48
TRIM28-206ENST00000595974 SYNGR2O43760 224 aa12.06□□□□□ -0.48
TRIM28-206ENST00000595974 ADAP1O75689 374 aa12.06□□□□□ -0.48
TRIM28-206ENST00000595974 APOHP02749 345 aaPredicted RBP12.06□□□□□ -0.48
TRIM28-206ENST00000595974 CRYBB3P26998 211 aa12.06□□□□□ -0.48
TRIM28-206ENST00000595974 PAFAH1B2P68402 229 aa12.06□□□□□ -0.48
TRIM28-206ENST00000595974 S100ZQ8WXG8 99 aa12.06□□□□□ -0.48
TRIM28-206ENST00000595974 TRAV2A0A0B4J234 112 aa12.05□□□□□ -0.48
TRIM28-206ENST00000595974 A6NHS1 94 aa12.05□□□□□ -0.48
TRIM28-206ENST00000595974 C3orf84H3BNL1 204 aa12.05□□□□□ -0.48
TRIM28-206ENST00000595974 TOMM40O96008 361 aa12.05□□□□□ -0.48
TRIM28-206ENST00000595974 IFNA21P01568 189 aa12.05□□□□□ -0.48
TRIM28-206ENST00000595974 GPX4P36969 197 aaPredicted RBP12.05□□□□□ -0.48
TRIM28-206ENST00000595974 CMC4P56277 68 aaPredicted RBP12.05□□□□□ -0.48
TRIM28-206ENST00000595974 RPP30P78346 268 aaKnown RBP12.05□□□□□ -0.48
TRIM28-206ENST00000595974 MUC7Q8TAX7 377 aa12.05□□□□□ -0.48
TRIM28-206ENST00000595974 SLC35E1Q96K37 410 aa12.05□□□□□ -0.48
TRIM28-206ENST00000595974 RETNQ9HD89 108 aa12.05□□□□□ -0.48
TRIM28-206ENST00000595974 IGKV3-7A0A075B6H7 116 aa12.04□□□□□ -0.48
TRIM28-206ENST00000595974 IGHV3-66A0A0C4DH42 116 aa12.04□□□□□ -0.48
TRIM28-206ENST00000595974 DFFBO76075 338 aa12.04□□□□□ -0.48
TRIM28-206ENST00000595974 TFPI2P48307 235 aa12.04□□□□□ -0.48
TRIM28-206ENST00000595974 GRAMD2BQ96HH9 432 aa12.04□□□□□ -0.48
TRIM28-206ENST00000595974 MAGT1Q9H0U3 335 aa12.04□□□□□ -0.48
TRIM28-206ENST00000595974 EDA2RQ9HAV5 297 aa12.04□□□□□ -0.48
TRIM28-206ENST00000595974 MPTX1A8MV57 137 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 WRBO00258 174 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 TCRBP04435 133 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 IL4P05112 153 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 HNRNPCP07910 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRIM28-206ENST00000595974 RD3LP0DJH9 198 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 P2RY1P47900 373 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 APOC4P55056 127 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 ID3Q02535 119 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 GAMTQ14353 236 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 LILRB2Q8N423 598 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 GBGT1Q8N5D6 347 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 OR4D5Q8NGN0 318 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 MITD1Q8WV92 249 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 MS4A6AQ9H2W1 248 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 PTTG2Q9NZH5 202 aa12.03□□□□□ -0.48
TRIM28-206ENST00000595974 PAIP2BQ9ULR5 123 aaKnown RBP12.03□□□□□ -0.48
TRIM28-206ENST00000595974 KMT2CQ8NEZ4 4911 aaKnown RBP12.03□□□□□ -0.48
TRIM28-206ENST00000595974 ZFP92A6NM28 416 aa12.02□□□□□ -0.49
TRIM28-206ENST00000595974 DNASE2O00115 360 aaPredicted RBP12.02□□□□□ -0.49
TRIM28-206ENST00000595974 NKX2-1P43699 371 aaPredicted RBP12.02□□□□□ -0.49
TRIM28-206ENST00000595974 EIF2B2P49770 351 aaKnown RBP12.02□□□□□ -0.49
TRIM28-206ENST00000595974 RPL11P62913 178 aaKnown RBP12.02□□□□□ -0.49
TRIM28-206ENST00000595974 USF2Q15853 346 aaPredicted RBP12.02□□□□□ -0.49
TRIM28-206ENST00000595974 OR51G1Q8NGK1 321 aa12.02□□□□□ -0.49
TRIM28-206ENST00000595974 MAP6D1Q9H9H5 199 aa12.02□□□□□ -0.49
TRIM28-206ENST00000595974 NUDT15Q9NV35 164 aa12.02□□□□□ -0.49
TRIM28-206ENST00000595974 U3KQE9 123 aa12.02□□□□□ -0.49
TRIM28-206ENST00000595974 KIR2DL5BA0A0G2JN68 375 aa12.01□□□□□ -0.49
TRIM28-206ENST00000595974 KIR2DL5BA0A0G2JPC4 375 aa12.01□□□□□ -0.49
TRIM28-206ENST00000595974 FABP1P07148 127 aa12.01□□□□□ -0.49
TRIM28-206ENST00000595974 PSG1P11464 419 aa12.01□□□□□ -0.49
TRIM28-206ENST00000595974 KIR2DL5AQ8N109 375 aa12.01□□□□□ -0.49
TRIM28-206ENST00000595974 KIR2DL5BQ8NHK3 375 aa12.01□□□□□ -0.49
TRIM28-206ENST00000595974 WDR12Q9GZL7 423 aaKnown RBP12.01□□□□□ -0.49
TRIM28-206ENST00000595974 STRAPQ9Y3F4 350 aaKnown RBP12.01□□□□□ -0.49
TRIM28-206ENST00000595974 IGKV1D-37A0A075B6S9 117 aa12□□□□□ -0.49
TRIM28-206ENST00000595974 TRAV6A0A075B6T7 132 aa12□□□□□ -0.49
TRIM28-206ENST00000595974 HELTA6NFD8 242 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 285.6 ms