RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 WT1-ASQ06250 92 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 ETFRF1Q6IPR1 90 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 EBLN2Q6P2I7 272 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 VHLLQ6RSH7 139 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 OR10X1Q8NGY0 326 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 NPIPB3Q92617 1050 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 TMEM186Q96B77 213 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 CHCHD1Q96BP2 118 aaKnown RBP10.69□□□□□ -0.7
VRK3-209ENST00000594948 MLST8Q9BVC4 326 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 GFRA4Q9GZZ7 299 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 TRIOBPQ9H2D6 2365 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 FNDC4Q9H6D8 234 aaPredicted RBP10.69□□□□□ -0.7
VRK3-209ENST00000594948 HIGD1CA8MV81 97 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 CRXO43186 299 aaPredicted RBP10.68□□□□□ -0.7
VRK3-209ENST00000594948 CRYGCP07315 174 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 PAX2Q02962 417 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 RBMXL3Q8N7X1 1067 aaKnown RBP10.68□□□□□ -0.7
VRK3-209ENST00000594948 DEFB108BQ8NET1 73 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 NUP37Q8NFH4 326 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 RND1Q92730 232 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 GPR82Q96P67 336 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 PRSS22Q9GZN4 317 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 RPP21Q9H633 154 aaKnown RBP10.68□□□□□ -0.7
VRK3-209ENST00000594948 SSUH2Q9Y2M2 353 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 FAM231BA6NCW3 169 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 A8MWL6 223 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 CEACAM4O75871 244 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 REG1BP48304 166 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 HBBP68871 147 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 SSBP2P81877 361 aaPredicted RBP10.68□□□□□ -0.7
VRK3-209ENST00000594948 OR2D3Q8NGH3 330 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 FMC1Q96HJ9 113 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 TRGV9Q99603 122 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 WASHC3Q9Y3C0 194 aa10.68□□□□□ -0.7
VRK3-209ENST00000594948 TRAV34A0A0B4J273 112 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 IGHV1-69-2A0A0G2JMI3 117 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 E7EUB6 86 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 IGLV2-23P01705 113 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 TNFRSF1AP19438 455 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 ZNF137PP52743 207 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 RNASEKQ6P5S7 137 aaKnown RBP10.67□□□□□ -0.7
VRK3-209ENST00000594948 ZNF841Q6ZN19 808 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 LINC00305Q7Z4B0 112 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 TMEM70Q9BUB7 260 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 ZNRD1Q9P1U0 126 aa10.67□□□□□ -0.7
VRK3-209ENST00000594948 TCF21O43680 179 aa10.66□□□□□ -0.7
VRK3-209ENST00000594948 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
VRK3-209ENST00000594948 PLP1P60201 277 aa10.66□□□□□ -0.7
VRK3-209ENST00000594948 VMA21Q3ZAQ7 101 aa10.66□□□□□ -0.7
VRK3-209ENST00000594948 C1orf185Q5T7R7 199 aa10.66□□□□□ -0.7
VRK3-209ENST00000594948 LCN12Q6JVE5 192 aa10.66□□□□□ -0.7
VRK3-209ENST00000594948 MUC15Q8N387 334 aa10.66□□□□□ -0.7
VRK3-209ENST00000594948 C5orf17Q8NAS9 161 aa10.66□□□□□ -0.7
VRK3-209ENST00000594948 ST6GALNAC6Q969X2 333 aa10.66□□□□□ -0.7
VRK3-209ENST00000594948 ST20Q9HBF5 79 aa10.66□□□□□ -0.7
VRK3-209ENST00000594948 COX11Q9Y6N1 276 aa10.66□□□□□ -0.7
VRK3-209ENST00000594948 IGLC7A0M8Q6 106 aa10.65□□□□□ -0.7
VRK3-209ENST00000594948 VWC2LB2RUY7 222 aa10.65□□□□□ -0.7
VRK3-209ENST00000594948 IGLL1P15814 213 aa10.65□□□□□ -0.7
VRK3-209ENST00000594948 MC5RP33032 325 aa10.65□□□□□ -0.7
VRK3-209ENST00000594948 FAM120AOSQ5T036 256 aa10.65□□□□□ -0.7
VRK3-209ENST00000594948 ZNF738Q8NE65 137 aa10.65□□□□□ -0.7
VRK3-209ENST00000594948 OR4F17Q8NGA8 305 aa10.65□□□□□ -0.7
VRK3-209ENST00000594948 URB1-AS1Q96HZ7 61 aa10.65□□□□□ -0.7
VRK3-209ENST00000594948 FAM215AQ9Y5M1 114 aa10.65□□□□□ -0.7
VRK3-209ENST00000594948 PGPA6NDG6 321 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 CORTO00230 105 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 LTAP01374 205 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 OR5AL1P0C617 328 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 CD40P25942 277 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 GNG5P63218 68 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 UBE2V1Q13404 147 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 Q56UQ5 140 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 PRR27Q6MZM9 219 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 SSX8Q7RTT4 187 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 ZADH2Q8N4Q0 377 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 C22orf15Q8WYQ4 148 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 ASCL3Q9NQ33 180 aa10.65□□□□□ -0.71
VRK3-209ENST00000594948 ZDBF2Q9HCK1 2354 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 TNRC18O15417 2968 aaPredicted RBP10.64□□□□□ -0.71
VRK3-209ENST00000594948 TRBV6-1A0A0K0K1D8 114 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 NPIPB6E9PJ23 425 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 M0R296 226 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 MOSP00540 346 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 NBEAP1P0C6P0 100 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 LGALS7P47929 136 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 CAMPP49913 170 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 SRSF6Q13247 344 aaKnown RBP10.64□□□□□ -0.71
VRK3-209ENST00000594948 TMEM200BQ69YZ2 307 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 ALKBH2Q6NS38 261 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 ATOH7Q8N100 152 aa10.64□□□□□ -0.71
VRK3-209ENST00000594948 MRPL36Q9P0J6 103 aaKnown RBP10.64□□□□□ -0.71
VRK3-209ENST00000594948 A0A1W2PPI3 338 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 P01737 135 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 GP9P14770 177 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 GPR6P46095 362 aaPredicted RBP10.63□□□□□ -0.71
VRK3-209ENST00000594948 PTTG1IPP53801 180 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 MAJINQ3KP22 176 aa10.63□□□□□ -0.71
VRK3-209ENST00000594948 RBPMS2Q6ZRY4 209 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms