RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 RNASE2P10153 161 aaKnown RBP10.48□□□□□ -0.73
VRK3-205ENST00000593919 OPRK1P41145 380 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 ERHP84090 104 aaKnown RBP10.48□□□□□ -0.73
VRK3-205ENST00000593919 ARSJQ5FYB0 599 aaPredicted RBP10.48□□□□□ -0.73
VRK3-205ENST00000593919 MIC13Q5XKP0 118 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 ZNF343Q6P1L6 599 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 TMEM219Q86XT9 240 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 BCL6BQ8N143 479 aaPredicted RBP10.48□□□□□ -0.73
VRK3-205ENST00000593919 LINC00469Q8N7U9 141 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 OR4F5Q8NH21 305 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 SSMEM1Q8WWF3 244 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 YPEL4Q96NS1 127 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 OR4F4Q96R69 305 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 PXMP4Q9Y6I8 212 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 URGCP-MRPS24S4R325 110 aa10.48□□□□□ -0.73
VRK3-205ENST00000593919 A0A1W2PPV4 95 aa10.47□□□□□ -0.73
VRK3-205ENST00000593919 H3BUX3 64 aa10.47□□□□□ -0.73
VRK3-205ENST00000593919 PAGE4O60829 102 aa10.47□□□□□ -0.73
VRK3-205ENST00000593919 REG1AP05451 166 aa10.47□□□□□ -0.73
VRK3-205ENST00000593919 AREGP15514 252 aa10.47□□□□□ -0.73
VRK3-205ENST00000593919 AKR1D1P51857 326 aa10.47□□□□□ -0.73
VRK3-205ENST00000593919 C2orf83Q53S99 150 aa10.47□□□□□ -0.73
VRK3-205ENST00000593919 RPUSD4Q96CM3 377 aaKnown RBP10.47□□□□□ -0.73
VRK3-205ENST00000593919 NPVFQ9HCQ7 196 aa10.47□□□□□ -0.73
VRK3-205ENST00000593919 SEC14L6B5MCN3 397 aa10.46□□□□□ -0.73
VRK3-205ENST00000593919 NDPQ00604 133 aa10.46□□□□□ -0.73
VRK3-205ENST00000593919 FXYD3Q14802 87 aa10.46□□□□□ -0.73
VRK3-205ENST00000593919 ODF1Q14990 250 aa10.46□□□□□ -0.73
VRK3-205ENST00000593919 RBM14Q96PK6 669 aaKnown RBP10.46□□□□□ -0.73
VRK3-205ENST00000593919 SMIM7Q9BQ49 75 aa10.46□□□□□ -0.73
VRK3-205ENST00000593919 SLC25A33Q9BSK2 321 aa10.46□□□□□ -0.73
VRK3-205ENST00000593919 FAM103A1Q9BTL3 118 aaKnown RBP10.46□□□□□ -0.73
VRK3-205ENST00000593919 SDF2L1Q9HCN8 221 aa10.46□□□□□ -0.73
VRK3-205ENST00000593919 BAHCC1Q9P281 2608 aa10.46□□□□□ -0.73
VRK3-205ENST00000593919 MTORP42345 2549 aa10.46□□□□□ -0.73
VRK3-205ENST00000593919 CX3CL1P78423 397 aa10.46□□□□□ -0.74
VRK3-205ENST00000593919 KRTAP1-1Q07627 177 aa10.46□□□□□ -0.74
VRK3-205ENST00000593919 PNRC1Q12796 327 aaPredicted RBP10.46□□□□□ -0.74
VRK3-205ENST00000593919 DEFB112Q30KQ8 113 aa10.46□□□□□ -0.74
VRK3-205ENST00000593919 ZNF562Q6V9R5 426 aa10.46□□□□□ -0.74
VRK3-205ENST00000593919 Q8WTZ3 238 aa10.46□□□□□ -0.74
VRK3-205ENST00000593919 IGHV7-81A0A0B4J1V7 117 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 B4DEV8 164 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 HLA-DRB1P01911 266 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 UBE2G2P60604 165 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 LY6EQ16553 131 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 TEPPQ6URK8 271 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 MRPL41Q8IXM3 137 aaKnown RBP10.45□□□□□ -0.74
VRK3-205ENST00000593919 C5orf56Q8N8D9 126 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 ARPC1AQ92747 370 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 RASL11BQ9BPW5 248 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 MOB4Q9Y3A3 225 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 LSM4Q9Y4Z0 139 aaKnown RBP10.45□□□□□ -0.74
VRK3-205ENST00000593919 SOX15O60248 233 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 CXCL1P09341 107 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 RPS10P46783 165 aaKnown RBP10.45□□□□□ -0.74
VRK3-205ENST00000593919 ATP5IP56385 69 aaPredicted RBP10.45□□□□□ -0.74
VRK3-205ENST00000593919 SNRPEP62304 92 aaKnown RBP10.45□□□□□ -0.74
VRK3-205ENST00000593919 ELOBQ15370 118 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 ADIRFQ15847 76 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 C19orf35Q6ZS72 473 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 C9orf139Q6ZV77 190 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 ZNF114Q8NC26 417 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 ABHD5Q8WTS1 349 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 HSPB9Q9BQS6 159 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 PARLQ9H300 379 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 KCNIP2Q9NS61 270 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 NAT8Q9UHE5 227 aa10.45□□□□□ -0.74
VRK3-205ENST00000593919 TGIF2-C20orf24A0A0A6YYL0 155 aa10.44□□□□□ -0.74
VRK3-205ENST00000593919 C11orf94C9JXX5 98 aa10.44□□□□□ -0.74
VRK3-205ENST00000593919 TMEM250H0YL14 139 aa10.44□□□□□ -0.74
VRK3-205ENST00000593919 ARL14EPLP0DKL9 152 aa10.44□□□□□ -0.74
VRK3-205ENST00000593919 MEOX2P50222 304 aa10.44□□□□□ -0.74
VRK3-205ENST00000593919 STPG3Q8N7X2 389 aa10.44□□□□□ -0.74
VRK3-205ENST00000593919 SRSF8Q9BRL6 282 aaKnown RBP10.44□□□□□ -0.74
VRK3-205ENST00000593919 A6NDX4 124 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 SH2D7A6NKC9 451 aaPredicted RBP10.43□□□□□ -0.74
VRK3-205ENST00000593919 CD5LO43866 347 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 AMY1AP04745 511 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 S100A6P06703 90 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 SUB1P53999 127 aaKnown RBP eCLIP10.43□□□□□ -0.74
VRK3-205ENST00000593919 RAB31Q13636 194 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 TMEM241Q24JQ0 296 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 CST9LP1Q5W188 147 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 CYP2G1PQ6ZSU1 146 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 IL17RELQ6ZVW7 336 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 CUBNO60494 3623 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 CXorf65A6NEN9 183 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 ATP5G3P48201 142 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 MFAP2P55001 183 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 KIAA0141Q14154 515 aaPredicted RBP10.43□□□□□ -0.74
VRK3-205ENST00000593919 SPATA31B1PQ5VZV4 182 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 PITPNC1Q9UKF7 332 aa10.43□□□□□ -0.74
VRK3-205ENST00000593919 F11RQ9Y624 299 aaKnown RBP10.43□□□□□ -0.74
VRK3-205ENST00000593919 IGHV4-59P01825 116 aa10.42□□□□□ -0.74
VRK3-205ENST00000593919 MLANAQ16655 118 aa10.42□□□□□ -0.74
VRK3-205ENST00000593919 ASPHD1Q5U4P2 390 aa10.42□□□□□ -0.74
VRK3-205ENST00000593919 SPNS3Q6ZMD2 512 aa10.42□□□□□ -0.74
VRK3-205ENST00000593919 OR1P1Q8NH06 330 aa10.42□□□□□ -0.74
VRK3-205ENST00000593919 ZNF48Q96MX3 618 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms