RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 SMIM31A0A1B0GVY4 71 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 A0A1W2PS18 150 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 RTL8CO15255 209 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 CDS2O95674 445 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 AMBPP02760 352 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 SMIM18P0DKX4 95 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 RND2P52198 227 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 DHRS2Q13268 280 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 MEF2DQ14814 521 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 CTF1Q16619 201 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 PSMG4Q5JS54 123 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 GDF5OSQ5U4N7 250 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 SELENOHQ8IZQ5 122 aaKnown RBP7.65□□□□□ -1.18
USE1-203ENST00000593597 TMEM230Q96A57 120 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 GPR146Q96CH1 333 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 EXTL2Q9UBQ6 330 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 TBC1D24Q9ULP9 559 aa7.65□□□□□ -1.18
USE1-203ENST00000593597 FAM25AB3EWG3 89 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 FAM25CB3EWG5 89 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 FAM25GB3EWG6 89 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 FAM90A26D6RGX4 464 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 H3BMM0 161 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 GABARAPO95166 117 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 HNRNPCP07910 306 aaKnown RBP eCLIP7.64□□□□□ -1.19
USE1-203ENST00000593597 SUB1P53999 127 aaKnown RBP eCLIP7.64□□□□□ -1.19
USE1-203ENST00000593597 SPCS3P61009 180 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 DHODHQ02127 395 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 C2orf83Q53S99 150 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 TMEM41BQ5BJD5 291 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 TMEM229BQ8NBD8 167 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 OR52E5Q8NH55 327 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 TERB2Q8NHR7 220 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 PDCD10Q9BUL8 212 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 RNF126Q9BV68 326 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 TMEM222Q9H0R3 208 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 PRR13Q9NZ81 148 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 COPZ2Q9P299 210 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 CACNG5Q9UF02 275 aa7.64□□□□□ -1.19
USE1-203ENST00000593597 APOBP04114 4563 aaKnown RBP7.64□□□□□ -1.19
USE1-203ENST00000593597 HELTA6NFD8 242 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 TNFAIP8O95379 198 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 RAB3DO95716 219 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 TBPP20226 339 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 OR10J1P30954 320 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 HTR2BP41595 481 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 RORCP51449 518 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 YPEL3P61236 119 aaPredicted RBP7.63□□□□□ -1.19
USE1-203ENST00000593597 SCGB2B2Q4G0G5 96 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 STEAP1BQ6NZ63 245 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 OR1S2Q8NGQ3 325 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 NAA60Q9H7X0 242 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 XCL2Q9UBD3 114 aa7.63□□□□□ -1.19
USE1-203ENST00000593597 IGKV1D-37A0A075B6S9 117 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 DEFB131BA0A096LNP1 70 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 TEX13DA0A0J9YY54 714 aaPredicted RBP7.62□□□□□ -1.19
USE1-203ENST00000593597 SOCS3O14543 225 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 BUB3O43684 328 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 IL4P05112 153 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 HLA-DRB4P13762 266 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 NMSQ5H8A3 153 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 ZNF705AQ6ZN79 300 aaPredicted RBP7.62□□□□□ -1.19
USE1-203ENST00000593597 CCDC71LQ8N9Z2 235 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 SLC24A4Q8NFF2 622 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 ZFAND1Q8TCF1 268 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 RNASEH2CQ8TDP1 164 aaKnown RBP7.62□□□□□ -1.19
USE1-203ENST00000593597 NPIPB3Q92617 1050 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 RBPMSQ93062 196 aaKnown RBP7.62□□□□□ -1.19
USE1-203ENST00000593597 RRNAD1Q96FB5 475 aaKnown RBP7.62□□□□□ -1.19
USE1-203ENST00000593597 WDR12Q9GZL7 423 aaKnown RBP7.62□□□□□ -1.19
USE1-203ENST00000593597 VCX3AQ9NNX9 186 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 ENY2Q9NPA8 101 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 NRN1Q9NPD7 142 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 HLA-DRB4X5D2U9 266 aa7.62□□□□□ -1.19
USE1-203ENST00000593597 TRAV30A0A087WSZ9 112 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 RPS10-NUDT3A0A1W2PQS6 291 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 CRYM-AS1A6NIL9 109 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 ZNF705FA8MVS1 300 aaPredicted RBP7.61□□□□□ -1.19
USE1-203ENST00000593597 ATG12O94817 140 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 TOMM40O96008 361 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 ZNF705DP0CH99 300 aaPredicted RBP7.61□□□□□ -1.19
USE1-203ENST00000593597 ZNF705BP0CI00 300 aaPredicted RBP7.61□□□□□ -1.19
USE1-203ENST00000593597 PSG1P11464 419 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 SLC25A4P12235 298 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 ZNF182P17025 639 aaPredicted RBP7.61□□□□□ -1.19
USE1-203ENST00000593597 FXYD7P58549 80 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 TAS2R19P59542 299 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 GPR107Q5VW38 600 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 TMEM268Q5VZI3 342 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 FAM219AQ8IW50 185 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 ZNF709Q8N972 641 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 OR51G1Q8NGK1 321 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 OR4C16Q8NGL9 310 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 RNASE11Q8TAA1 199 aaKnown RBP7.61□□□□□ -1.19
USE1-203ENST00000593597 Q8WTZ3 238 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 C17orf77Q96MU5 243 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 HEYLQ9NQ87 328 aaPredicted RBP7.61□□□□□ -1.19
USE1-203ENST00000593597 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.61□□□□□ -1.19
USE1-203ENST00000593597 GPR132Q9UNW8 380 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 DNAH5Q8TE73 4624 aa7.61□□□□□ -1.19
USE1-203ENST00000593597 GABARAPH6UMI1 98 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms