RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 ISLRO14498 428 aa13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 MGST1P10620 155 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 CBLN1P23435 193 aa13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 ZNF329Q86UD4 541 aa13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 GBGT1Q8N5D6 347 aa13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 TMEM116Q8NCL8 245 aa13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 OR1B1Q8NGR6 318 aa13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 FXYD5Q96DB9 178 aa13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 FBXL15Q9H469 300 aa13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 CBLN4Q9NTU7 201 aa13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 F11RQ9Y624 299 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-217ENST00000592741 TRAV20A0A0B4J274 112 aa13.25□□□□□ -0.29
PRKCSH-217ENST00000592741 TEX22C9J3V5 150 aa13.25□□□□□ -0.29
PRKCSH-217ENST00000592741 LY6LH3BQJ8 138 aa13.25□□□□□ -0.29
PRKCSH-217ENST00000592741 IGLV2-8P01709 118 aa13.25□□□□□ -0.29
PRKCSH-217ENST00000592741 ORM2P19652 201 aa13.25□□□□□ -0.29
PRKCSH-217ENST00000592741 PLGLAQ15195 96 aa13.25□□□□□ -0.29
PRKCSH-217ENST00000592741 C19orf35Q6ZS72 473 aa13.25□□□□□ -0.29
PRKCSH-217ENST00000592741 OR8I2Q8N0Y5 310 aa13.25□□□□□ -0.29
PRKCSH-217ENST00000592741 RNASE7Q9H1E1 156 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-217ENST00000592741 MRPL18Q9H0U6 180 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-217ENST00000592741 DCHS1Q96JQ0 3298 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 KALRNO60229 2985 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 TRBV9A0A0B4J1U6 114 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 PEX7O00628 323 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 IBA57Q5T440 356 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 TPTE2P1Q5T6R2 138 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 RUSC1-AS1Q66K80 236 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 SRSF12Q8WXF0 261 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 NAV3Q8IVL0 2385 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 IGHV3-21A0A0B4J1V1 117 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 HYPMO75409 117 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 GZMBP10144 247 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 IER3P46695 156 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 NHLH1Q02575 133 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 FXYD3Q14802 87 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 C9orf152Q5JTZ5 239 aa13.24□□□□□ -0.29
PRKCSH-217ENST00000592741 MALRD1Q5VYJ5 2156 aa13.23□□□□□ -0.29
PRKCSH-217ENST00000592741 TLN1Q9Y490 2541 aaKnown RBP13.23□□□□□ -0.29
PRKCSH-217ENST00000592741 LY6HO94772 140 aa13.23□□□□□ -0.29
PRKCSH-217ENST00000592741 HTR1DP28221 377 aa13.23□□□□□ -0.29
PRKCSH-217ENST00000592741 PKIAP61925 76 aa13.23□□□□□ -0.29
PRKCSH-217ENST00000592741 NEU4Q8WWR8 484 aaPredicted RBP13.23□□□□□ -0.29
PRKCSH-217ENST00000592741 CEP295Q9C0D2 2601 aa13.23□□□□□ -0.29
PRKCSH-217ENST00000592741 FCN1O00602 326 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 TIMM23O14925 209 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 SRSF8Q9BRL6 282 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 GNB1LQ9BYB4 327 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 SNURFLB1AK76 121 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 TSTD3H0UI37 97 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 ARF6P62330 175 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 CX3CL1P78423 397 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 COX19Q49B96 90 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 C11orf71Q6IPW1 123 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 WDR73Q6P4I2 378 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 OR11H6Q8NGC7 330 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 SERTAD4Q9NUC0 356 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 DPM3Q9P2X0 92 aa13.22□□□□□ -0.29
PRKCSH-217ENST00000592741 PLP1P60201 277 aa13.21□□□□□ -0.29
PRKCSH-217ENST00000592741 TMEM256Q8N2U0 113 aa13.21□□□□□ -0.29
PRKCSH-217ENST00000592741 NHLRC2Q8NBF2 726 aa13.21□□□□□ -0.29
PRKCSH-217ENST00000592741 LINC00479Q96M42 142 aa13.21□□□□□ -0.29
PRKCSH-217ENST00000592741 SMIM27A0A1W2PRY6 76 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 GRIFINA4D1Z8 144 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 ZNF705GA8MUZ8 300 aaPredicted RBP13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 M0R1W7 72 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 CNIH1O95406 144 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 MT-ND6P03923 174 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 CRISP2P16562 243 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 CEACAM3P40198 252 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 MYCNOSP40205 109 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 RANP62826 216 aaKnown RBP13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 MMDQ15546 238 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 BAGE2Q86Y30 109 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 BLNKQ8WV28 456 aa13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 SSBP3Q9BWW4 388 aaPredicted RBP13.21□□□□□ -0.3
PRKCSH-217ENST00000592741 PLXNB1O43157 2135 aa13.2□□□□□ -0.3
PRKCSH-217ENST00000592741 LOC105371242A0A075B767 164 aa13.2□□□□□ -0.3
PRKCSH-217ENST00000592741 A0A1B0GUS0 222 aa13.2□□□□□ -0.3
PRKCSH-217ENST00000592741 LDLRAD2Q5SZI1 272 aa13.2□□□□□ -0.3
PRKCSH-217ENST00000592741 CMTM2Q8TAZ6 248 aa13.2□□□□□ -0.3
PRKCSH-217ENST00000592741 SLC25A5P05141 298 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 TCL1AP56279 114 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 FAM209BQ5JX69 171 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 FAM231DQ6ZW35 169 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 HIGD1AQ9Y241 93 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 TRAV34A0A0B4J273 112 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 I3L2K1 104 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 NBR2O15453 112 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 SNRPCP09234 159 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 UBE2G1P62253 170 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 GNG5P63218 68 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 DEFA6Q01524 100 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 TMEM183BQ1AE95 376 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 WNT10AQ9GZT5 417 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 GSX1Q9H4S2 264 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 NAT8BQ9UHF3 227 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 EPDR1Q9UM22 224 aa13.19□□□□□ -0.3
PRKCSH-217ENST00000592741 HILPDAQ9Y5L2 63 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms