RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TREML4Q6UXN2 200 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 Q71RC1 249 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-228ENST00000592705 IGHV1-18A0A0C4DH31 117 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 HIGD1CA8MV81 97 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 STAG3L3P0CL85 134 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 PLP1P60201 277 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 FOXL1Q12952 345 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 GCSAMLQ5JQS6 135 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 TMEM136Q6ZRR5 245 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 OR1N2Q8NGR9 330 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 C14orf144Q96I85 54 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 Q9H3A6 140 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 PRDM13Q9H4Q3 707 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 PHLDA3Q9Y5J5 127 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 TP53BP1Q12888 1972 aaPredicted RBP10.52□□□□□ -0.72
DNMT1-228ENST00000592705 GATA3P23771 443 aa10.52□□□□□ -0.72
DNMT1-228ENST00000592705 MBNL2Q5VZF2 373 aaKnown RBP10.52□□□□□ -0.72
DNMT1-228ENST00000592705 PRELID3AQ96N28 172 aa10.52□□□□□ -0.72
DNMT1-228ENST00000592705 CD69Q07108 199 aa10.52□□□□□ -0.73
DNMT1-228ENST00000592705 RPP25LQ8N5L8 163 aaKnown RBP10.52□□□□□ -0.73
DNMT1-228ENST00000592705 ZNF414Q96IQ9 312 aa10.52□□□□□ -0.73
DNMT1-228ENST00000592705 OTORQ9NRC9 128 aa10.52□□□□□ -0.73
DNMT1-228ENST00000592705 PEF1Q9UBV8 284 aaKnown RBP10.52□□□□□ -0.73
DNMT1-228ENST00000592705 ETV2O00321 342 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-228ENST00000592705 APOHP02749 345 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-228ENST00000592705 CIARTQ8N365 385 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-228ENST00000592705 FAM19A2Q8N3H0 131 aa10.52□□□□□ -0.73
DNMT1-228ENST00000592705 ABCA1O95477 2261 aa10.52□□□□□ -0.73
DNMT1-228ENST00000592705 HIST1H4GQ99525 98 aa10.52□□□□□ -0.73
DNMT1-228ENST00000592705 PLXNA2O75051 1894 aa10.52□□□□□ -0.73
DNMT1-228ENST00000592705 SNRNP200O75643 2136 aaKnown RBP10.52□□□□□ -0.73
DNMT1-228ENST00000592705 FBLL1A6NHQ2 334 aaKnown RBP10.51□□□□□ -0.73
DNMT1-228ENST00000592705 AMBPP02760 352 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 HTN3P15516 51 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 B3GALT5-AS1P59052 145 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 GFI1BQ5VTD9 330 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 RAB37Q96AX2 223 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 TFF1P04155 84 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 HGFACQ04756 655 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 OTOGLQ3ZCN5 2332 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 PGPEP1LA6NFU8 196 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 H3BVH4 76 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 DTX1Q86Y01 620 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 GGTLC1Q9BX51 225 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 PCNX2A6NKB5 2137 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 FOXA2Q9Y261 457 aaPredicted RBP10.51□□□□□ -0.73
DNMT1-228ENST00000592705 C7orf71A4D174 169 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 EPDR1Q9UM22 224 aa10.51□□□□□ -0.73
DNMT1-228ENST00000592705 LILRA1O75019 489 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 ZNF324O75467 553 aaPredicted RBP10.5□□□□□ -0.73
DNMT1-228ENST00000592705 PSMG4Q5JS54 123 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 FAM53AQ6NSI3 398 aaPredicted RBP10.5□□□□□ -0.73
DNMT1-228ENST00000592705 ZNF581Q9P0T4 197 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 ZNF257Q9Y2Q1 563 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 RFNGQ9Y644 331 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 FOXI3A8MTJ6 420 aaPredicted RBP10.5□□□□□ -0.73
DNMT1-228ENST00000592705 SRRM5B3KS81 715 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 AREGP15514 252 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 DLX6P56179 175 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 AMMECR1LQ6DCA0 310 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 Q6P435 159 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 TRBV20OR9-2A0A075B6H5 130 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 UBE2DNLQ8IWF7 75 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 PKDREJQ9NTG1 2253 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 PSPNO60542 156 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 CCL3L1P16619 93 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 LINC01551Q86U37 167 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 LAMTOR2Q9Y2Q5 125 aa10.5□□□□□ -0.73
DNMT1-228ENST00000592705 F11RQ9Y624 299 aaKnown RBP10.5□□□□□ -0.73
DNMT1-228ENST00000592705 C9JCJ5 164 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 ARPC1AQ92747 370 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 VOPP1Q96AW1 172 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 C21orf62Q9NYP8 219 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 FBXL7Q9UJT9 491 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 PSMB11A5LHX3 300 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 IGHV3-11P01762 117 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 UBE2L6O14933 153 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 GPX1P07203 203 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 GNG5P63218 68 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 C1orf147Q96MC9 270 aaPredicted RBP10.49□□□□□ -0.73
DNMT1-228ENST00000592705 BPESC1Q9GZL8 116 aa10.49□□□□□ -0.73
DNMT1-228ENST00000592705 BEX4Q9NWD9 120 aaPredicted RBP10.49□□□□□ -0.73
DNMT1-228ENST00000592705 SMIM13P0DJ93 91 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 CMC4P56277 68 aaPredicted RBP10.48□□□□□ -0.73
DNMT1-228ENST00000592705 COL4A6Q14031 1691 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 IGHV1-46P01743 117 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 PYYP10082 97 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 DMRTA1Q5VZB9 504 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 IGHV3-35A0A0C4DH35 117 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 SAP30O75446 220 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 HIST1H1AQ02539 215 aaPredicted RBP10.48□□□□□ -0.73
DNMT1-228ENST00000592705 CR1LQ2VPA4 569 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 PVRIGQ6DKI7 326 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 SPSB3Q6PJ21 355 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 ORMDL3Q8N138 153 aa10.48□□□□□ -0.73
DNMT1-228ENST00000592705 CADP27708 2225 aa10.47□□□□□ -0.73
DNMT1-228ENST00000592705 MSMBP08118 114 aa10.47□□□□□ -0.73
DNMT1-228ENST00000592705 ATP5L2Q7Z4Y8 100 aa10.47□□□□□ -0.73
DNMT1-228ENST00000592705 MGST2Q99735 147 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms