RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 ZNF331Q9NQX6 463 aaPredicted RBP9.34□□□□□ -0.91
ZNF540-210ENST00000592533 JKAMPQ9P055 326 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 PAM16Q9Y3D7 125 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 CACNA1HO95180 2353 aa9.34□□□□□ -0.91
ZNF540-210ENST00000592533 A0A1W2PPI3 338 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 LGALS7P47929 136 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 PRRX1P54821 245 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 SLC35B1P78383 322 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 SLAQ13239 276 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 KIAA1644Q3SXP7 199 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 TMEM155Q4W5P6 130 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 LRRC10Q5BKY1 277 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 C18orf32Q8TCD1 76 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 NUDT11Q96G61 164 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 LINC00479Q96M42 142 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 SAP30LQ9HAJ7 183 aa9.34□□□□□ -0.92
ZNF540-210ENST00000592533 MRPL36Q9P0J6 103 aaKnown RBP9.34□□□□□ -0.92
ZNF540-210ENST00000592533 IGLC7A0M8Q6 106 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 NDUFB3O43676 98 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 FOSL1P15407 271 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 LOXP28300 417 aaPredicted RBP9.33□□□□□ -0.92
ZNF540-210ENST00000592533 REG1BP48304 166 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 DIAPH2-AS1Q14236 149 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 NUP35Q8NFH5 326 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 SERTAD4Q9NUC0 356 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 A0A0G2JNJ9 132 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 A0A1B0GXF2 115 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 THBDP07204 575 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 KRTDAPP60985 99 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 GAGE1Q13065 139 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 C10orf55Q5SWW7 151 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 TEX45Q8NA69 505 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 PERPQ96FX8 193 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 Q9UFV3 132 aa9.33□□□□□ -0.92
ZNF540-210ENST00000592533 C22orf46C9J442 243 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 CA1P00915 261 aaPredicted RBP9.32□□□□□ -0.92
ZNF540-210ENST00000592533 HIST1H1EP10412 219 aaKnown RBP9.32□□□□□ -0.92
ZNF540-210ENST00000592533 PLP1P60201 277 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 BSPH1Q075Z2 132 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 CT83Q5H943 113 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 GDF5OSQ5U4N7 250 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 LINC00305Q7Z4B0 112 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 SPACA3Q8IXA5 215 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 NHLRC2Q8NBF2 726 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 TMEM116Q8NCL8 245 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 MLST8Q9BVC4 326 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 CTSZQ9UBR2 303 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 EPDR1Q9UM22 224 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 CRYGBP07316 175 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 ZNF841Q6ZN19 808 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 TNFRSF14Q92956 283 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 FAM103A1Q9BTL3 118 aaKnown RBP9.32□□□□□ -0.92
ZNF540-210ENST00000592533 SSUH2Q9Y2M2 353 aa9.32□□□□□ -0.92
ZNF540-210ENST00000592533 K7EM74 188 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 CA7P43166 264 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 LYPD2Q6UXB3 125 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 TMEM190Q8WZ59 177 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 TMEM68Q96MH6 324 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 ZNF318Q5VUA4 2279 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 C11orf42Q8N5U0 333 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 SSBP3Q9BWW4 388 aaPredicted RBP9.31□□□□□ -0.92
ZNF540-210ENST00000592533 PRSS22Q9GZN4 317 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 TNFRSF19Q9NS68 423 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 ZNF492Q9P255 531 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 CFAP47Q6ZTR5 3102 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 SLC25A17O43808 307 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 IGHV1-8P0DP01 117 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 PMCHP20382 165 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 MFAP2P55001 183 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 WFDC8Q8IUA0 241 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 ALKBH7Q9BT30 221 aaPredicted RBP9.31□□□□□ -0.92
ZNF540-210ENST00000592533 TPSG1Q9NRR2 321 aa9.31□□□□□ -0.92
ZNF540-210ENST00000592533 SOX21Q9Y651 276 aaPredicted RBP9.31□□□□□ -0.92
ZNF540-210ENST00000592533 GP9P14770 177 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 H1FXQ92522 213 aaKnown RBP9.3□□□□□ -0.92
ZNF540-210ENST00000592533 FMC1Q96HJ9 113 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 GPR82Q96P67 336 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 RBM14Q96PK6 669 aaKnown RBP9.3□□□□□ -0.92
ZNF540-210ENST00000592533 ARFGEF3Q5TH69 2177 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 TRAV34A0A0B4J273 112 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 CORTO00230 105 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 TOMM40O96008 361 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 LTAP01374 205 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 SPATA45Q537H7 98 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 RITA1Q96K30 269 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 UQCR10Q9UDW1 63 aa9.3□□□□□ -0.92
ZNF540-210ENST00000592533 ASPMQ8IZT6 3477 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 C19orf71A6NCJ1 209 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 IGLC2P0DOY2 106 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 IGLC3P0DOY3 106 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 C5orf17Q8NAS9 161 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 RNASE6Q93091 150 aaKnown RBP9.29□□□□□ -0.92
ZNF540-210ENST00000592533 GFRA4Q9GZZ7 299 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 TMEM133Q9H2Q1 129 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 HIGD1CA8MV81 97 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 UBE2G1P62253 170 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 MMDQ15546 238 aa9.29□□□□□ -0.92
ZNF540-210ENST00000592533 PMCHL1Q16048 86 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms