RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, human

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-216	ENST00000592445	TAS2R20	P59543	309 aa		13.93	□□□□□ -0.18
PRKCSH-216	ENST00000592445	TMEM88	Q6PEY1	159 aa		13.93	□□□□□ -0.18
PRKCSH-216	ENST00000592445	LYSMD2	Q8IV50	215 aa		13.93	□□□□□ -0.18
PRKCSH-216	ENST00000592445	VCX3B	Q9H321	246 aa		13.93	□□□□□ -0.18
PRKCSH-216	ENST00000592445	SEPSECS	Q9HD40	501 aa	Known RBP	13.93	□□□□□ -0.18
PRKCSH-216	ENST00000592445	HLA-DRB4	X5D2U9	266 aa		13.93	□□□□□ -0.18
PRKCSH-216	ENST00000592445		A0A0B4J293	547 aa		13.92	□□□□□ -0.18
PRKCSH-216	ENST00000592445	IGKV1-5	P01602	117 aa		13.92	□□□□□ -0.18
PRKCSH-216	ENST00000592445	PRSS3	P35030	304 aa		13.92	□□□□□ -0.18
PRKCSH-216	ENST00000592445	HSPA13	P48723	471 aa		13.92	□□□□□ -0.18
PRKCSH-216	ENST00000592445	IZUMO2	Q6UXV1	221 aa		13.92	□□□□□ -0.18
PRKCSH-216	ENST00000592445		Q8N1X5	172 aa		13.92	□□□□□ -0.18
PRKCSH-216	ENST00000592445	ATG101	Q9BSB4	218 aa		13.92	□□□□□ -0.18
PRKCSH-216	ENST00000592445	APOB	P04114	4563 aa	Known RBP	13.91	□□□□□ -0.18
PRKCSH-216	ENST00000592445	ANKRD65	E5RJM6	399 aa		13.91	□□□□□ -0.18
PRKCSH-216	ENST00000592445	FAM3B	P58499	235 aa	Predicted RBP	13.91	□□□□□ -0.18
PRKCSH-216	ENST00000592445	UBE2NL	Q5JXB2	153 aa		13.91	□□□□□ -0.18
PRKCSH-216	ENST00000592445	SIGLEC15	Q6ZMC9	328 aa		13.91	□□□□□ -0.18
PRKCSH-216	ENST00000592445	OR1S2	Q8NGQ3	325 aa		13.91	□□□□□ -0.18
PRKCSH-216	ENST00000592445	SCRT2	Q9NQ03	307 aa		13.91	□□□□□ -0.18
PRKCSH-216	ENST00000592445	NACA	E9PAV3	2078 aa		13.91	□□□□□ -0.18
PRKCSH-216	ENST00000592445	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.9	□□□□□ -0.18
PRKCSH-216	ENST00000592445	NKX2-1	P43699	371 aa	Predicted RBP	13.9	□□□□□ -0.18
PRKCSH-216	ENST00000592445	DHODH	Q02127	395 aa		13.9	□□□□□ -0.18
PRKCSH-216	ENST00000592445	OXA1L	Q15070	435 aa		13.9	□□□□□ -0.18
PRKCSH-216	ENST00000592445	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.9	□□□□□ -0.18
PRKCSH-216	ENST00000592445	TMEM127	O75204	238 aa		13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	ATG12	O94817	140 aa		13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	IL4	P05112	153 aa		13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	IGLC1	P0CG04	106 aa		13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	OR10J1	P30954	320 aa		13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	UCP3	P55916	312 aa		13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	GDF5OS	Q5U4N7	250 aa		13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	C6orf223	Q8N319	242 aa		13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	LINC00052	Q96N35	136 aa		13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	C7orf50	Q9BRJ6	194 aa	Known RBP	13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	GOLT1B	Q9Y3E0	138 aa		13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.89	□□□□□ -0.19
PRKCSH-216	ENST00000592445	DNAH5	Q8TE73	4624 aa		13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445	HBE1	P02100	147 aa		13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445		P0C879	139 aa		13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445	PGAM2	P15259	253 aa		13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445	RND2	P52198	227 aa		13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445	DEFB1	P60022	68 aa		13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445	YPEL3	P61236	119 aa	Predicted RBP	13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445	DAD1	P61803	113 aa		13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445	USF2	Q15853	346 aa	Predicted RBP	13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445	SAMD12	Q8N8I0	201 aa		13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445	C15orf53	Q8NAA6	179 aa		13.88	□□□□□ -0.19
PRKCSH-216	ENST00000592445	NBDY	A0A0U1RRE5	68 aa		13.87	□□□□□ -0.19
PRKCSH-216	ENST00000592445	LOC102723971	A0A1B0GUV8	181 aa		13.87	□□□□□ -0.19
PRKCSH-216	ENST00000592445	BUB3	O43684	328 aa		13.87	□□□□□ -0.19
PRKCSH-216	ENST00000592445	GSTZ1	O43708	216 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKCSH-216	ENST00000592445	PRSS54	Q6PEW0	395 aa		13.87	□□□□□ -0.19
PRKCSH-216	ENST00000592445	GSG1L	Q6UXU4	331 aa		13.87	□□□□□ -0.19
PRKCSH-216	ENST00000592445	OR4B1	Q8NGF8	309 aa		13.87	□□□□□ -0.19
PRKCSH-216	ENST00000592445	PI3	P19957	117 aa		13.86	□□□□□ -0.19
PRKCSH-216	ENST00000592445	HTR2B	P41595	481 aa		13.86	□□□□□ -0.19
PRKCSH-216	ENST00000592445	BSX	Q3C1V8	233 aa		13.86	□□□□□ -0.19
PRKCSH-216	ENST00000592445	CROCCP3	Q8IVE0	287 aa		13.86	□□□□□ -0.19
PRKCSH-216	ENST00000592445	RNASE11	Q8TAA1	199 aa	Known RBP	13.86	□□□□□ -0.19
PRKCSH-216	ENST00000592445	RRNAD1	Q96FB5	475 aa	Known RBP	13.86	□□□□□ -0.19
PRKCSH-216	ENST00000592445	TP53RK	Q96S44	253 aa		13.86	□□□□□ -0.19
PRKCSH-216	ENST00000592445	SAV1	Q9H4B6	383 aa	Predicted RBP	13.86	□□□□□ -0.19
PRKCSH-216	ENST00000592445	SLC25A4	P12235	298 aa		13.85	□□□□□ -0.19
PRKCSH-216	ENST00000592445	PIGP	P57054	158 aa		13.85	□□□□□ -0.19
PRKCSH-216	ENST00000592445	RRN3P1	Q2M238	152 aa		13.85	□□□□□ -0.19
PRKCSH-216	ENST00000592445	TRIM16L	Q309B1	348 aa		13.85	□□□□□ -0.19
PRKCSH-216	ENST00000592445	FOXI2	Q6ZQN5	318 aa		13.85	□□□□□ -0.19
PRKCSH-216	ENST00000592445	ZNF709	Q8N972	641 aa		13.85	□□□□□ -0.19
PRKCSH-216	ENST00000592445	GPX8	Q8TED1	209 aa		13.85	□□□□□ -0.19
PRKCSH-216	ENST00000592445	SLC35B3	Q9H1N7	401 aa		13.85	□□□□□ -0.19
PRKCSH-216	ENST00000592445	RAB26	Q9ULW5	256 aa		13.85	□□□□□ -0.19
PRKCSH-216	ENST00000592445	RD3L	P0DJH9	198 aa		13.84	□□□□□ -0.19
PRKCSH-216	ENST00000592445	RCVRN	P35243	200 aa		13.84	□□□□□ -0.19
PRKCSH-216	ENST00000592445	ID1	P41134	155 aa		13.84	□□□□□ -0.19
PRKCSH-216	ENST00000592445	RND3	P61587	244 aa		13.84	□□□□□ -0.19
PRKCSH-216	ENST00000592445	COQ8A	Q8NI60	647 aa		13.84	□□□□□ -0.19
PRKCSH-216	ENST00000592445	HEYL	Q9NQ87	328 aa	Predicted RBP	13.84	□□□□□ -0.19
PRKCSH-216	ENST00000592445	C3orf85	A0A1B0GTC6	90 aa		13.83	□□□□□ -0.2
PRKCSH-216	ENST00000592445	SPCS3	P61009	180 aa		13.83	□□□□□ -0.2
PRKCSH-216	ENST00000592445	PSG9	Q00887	426 aa		13.83	□□□□□ -0.2
PRKCSH-216	ENST00000592445	SPATA12	Q7Z6I5	190 aa		13.83	□□□□□ -0.2
PRKCSH-216	ENST00000592445	ZNRF2	Q8NHG8	242 aa		13.83	□□□□□ -0.2
PRKCSH-216	ENST00000592445	ZNF486	Q96H40	463 aa	Predicted RBP	13.83	□□□□□ -0.2
PRKCSH-216	ENST00000592445	CLUHP3	Q96NS8	147 aa		13.83	□□□□□ -0.2
PRKCSH-216	ENST00000592445	MAGT1	Q9H0U3	335 aa		13.83	□□□□□ -0.2
PRKCSH-216	ENST00000592445	SCPEP1	Q9HB40	452 aa		13.83	□□□□□ -0.2
PRKCSH-216	ENST00000592445		M0QYG6	137 aa		13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	TOMM40	O96008	361 aa		13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	RORC	P51449	518 aa		13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	SP6	Q3SY56	376 aa		13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	C1orf158	Q8N1D5	194 aa		13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	OR51G1	Q8NGK1	321 aa		13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	NPIPB3	Q92617	1050 aa		13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	ACY3	Q96HD9	319 aa		13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	TMEM208	Q9BTX3	173 aa		13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	WDR12	Q9GZL7	423 aa	Known RBP	13.82	□□□□□ -0.2
PRKCSH-216	ENST00000592445	KLK11	Q9UBX7	282 aa		13.82	□□□□□ -0.2

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