RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.13□□□□□ -1.27
BRCA1-226ENST00000591534 KANTRA0A1W2PQU2 76 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 OR11H12B2RN74 326 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 K7EPK0 472 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 TSC22D2O75157 780 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 SCGB2A1O75556 95 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 DEDDO75618 318 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 IFNA17P01571 189 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 S100A10P60903 97 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 SSBP2P81877 361 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-226ENST00000591534 EXOSC2Q13868 293 aaKnown RBP7.13□□□□□ -1.27
BRCA1-226ENST00000591534 GUCA2BQ16661 112 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 CD300EQ496F6 205 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-226ENST00000591534 AARDQ4LEZ3 155 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 ZNF585BQ52M93 769 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 CACNG5Q9UF02 275 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 U3KQ87 197 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 CSMD3Q7Z407 3707 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 SACSQ9NZJ4 4579 aa7.13□□□□□ -1.27
BRCA1-226ENST00000591534 FXYD6-FXYD2A0A087WZ82 144 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 BORCS7-ASMTA0A0B4J1R7 106 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 TRBV9A0A0B4J1U6 114 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 LINC00473A8K010 186 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 CORTO00230 105 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 SYNGR2O43760 224 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 GGCTO75223 188 aaKnown RBP7.12□□□□□ -1.27
BRCA1-226ENST00000591534 ADAP1O75689 374 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 DFFBO76075 338 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 S1PR2O95136 353 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 APELAP0DMC3 54 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 RAB11AP62491 216 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 RPL8P62917 257 aaKnown RBP7.12□□□□□ -1.27
BRCA1-226ENST00000591534 ERHP84090 104 aaKnown RBP7.12□□□□□ -1.27
BRCA1-226ENST00000591534 ZNF266Q14584 549 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 MRGPRG-AS1Q2M3A8 158 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 DEFB114Q30KQ6 69 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 FAM106AQ4KMX7 169 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 LINC00322Q6ZN03 302 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-226ENST00000591534 PUSL1Q8N0Z8 303 aaKnown RBP7.12□□□□□ -1.27
BRCA1-226ENST00000591534 TTC9CQ8N5M4 171 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 OR4D5Q8NGN0 318 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 OR1L8Q8NGR8 309 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 PINX1Q96BK5 328 aaKnown RBP7.12□□□□□ -1.27
BRCA1-226ENST00000591534 SMIM8Q96KF7 97 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 MFFQ9GZY8 342 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 SRD5A3Q9H8P0 318 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 HSPB7Q9UBY9 170 aa7.12□□□□□ -1.27
BRCA1-226ENST00000591534 IZUMO1RA6ND01 250 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 C15orf61A6NNL5 157 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 SRRM4A7MD48 611 aaKnown RBP7.11□□□□□ -1.27
BRCA1-226ENST00000591534 CEBPZOSA8MTT3 80 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 INS-IGF2F8WCM5 200 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 LGALS9O00182 355 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 BMPR1BO00238 502 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 PITX3O75364 302 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 KBTBD11O94819 623 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 TRBV12-3P01733 135 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 FOLR2P14207 255 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 G6PCP35575 357 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 HSPE1P61604 102 aaKnown RBP7.11□□□□□ -1.27
BRCA1-226ENST00000591534 TNFRSF9Q07011 255 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 ATP6V1FQ16864 119 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 C15orf32Q32M92 178 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 OR4A47Q6IF82 309 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 GPHB5Q86YW7 130 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 DEFB125Q8N687 156 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 TMEM167AQ8TBQ9 72 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 GPR146Q96CH1 333 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 AQP10Q96PS8 301 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 ZNF430Q9H8G1 570 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-226ENST00000591534 TMEM14BQ9NUH8 114 aa7.11□□□□□ -1.27
BRCA1-226ENST00000591534 STRAPQ9Y3F4 350 aaKnown RBP7.11□□□□□ -1.27
BRCA1-226ENST00000591534 STARD9Q9P2P6 4700 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 C2orf70A6NJV1 201 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 ZNF785A8K8V0 405 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 UPK2O00526 184 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 NDUFB8O95169 186 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 IFNA7P01567 189 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 HIST1H1BP16401 226 aaKnown RBP7.1□□□□□ -1.27
BRCA1-226ENST00000591534 S100A11P31949 105 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 SNCAP37840 140 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 HTR2BP41595 481 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 RPL30P62888 115 aaKnown RBP7.1□□□□□ -1.27
BRCA1-226ENST00000591534 DEFA5Q01523 94 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 IL15RAQ13261 267 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 LRRC37A5PQ49AS3 106 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 ETFRF1Q6IPR1 90 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 OR2C3Q8N628 320 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 LRRC20Q8TCA0 184 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 EEF1AKMT3Q96AZ1 226 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 OR10C1Q96KK4 312 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 FAM110AQ9BQ89 295 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 GGACTQ9BVM4 153 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 GGTLC1Q9BX51 225 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 RETNQ9HD89 108 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 KCNIP2Q9NS61 270 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 LYRM2Q9NU23 88 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-226ENST00000591534 THYN1Q9P016 225 aa7.1□□□□□ -1.27
BRCA1-226ENST00000591534 LSM5Q9Y4Y9 91 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms