RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	FAM3D	Q96BQ1	224 aa		4.27	□□□□□ -1.73
DNMT1-222	ENST00000590619	LINC01587	Q99440	93 aa		4.27	□□□□□ -1.73
DNMT1-222	ENST00000590619	DNAJC4	Q9NNZ3	241 aa		4.27	□□□□□ -1.73
DNMT1-222	ENST00000590619	FKBP11	Q9NYL4	201 aa		4.27	□□□□□ -1.73
DNMT1-222	ENST00000590619	PRND	Q9UKY0	176 aa		4.27	□□□□□ -1.73
DNMT1-222	ENST00000590619	RAB22A	Q9UL26	194 aa		4.27	□□□□□ -1.73
DNMT1-222	ENST00000590619	DIMT1	Q9UNQ2	313 aa	Known RBP	4.27	□□□□□ -1.73
DNMT1-222	ENST00000590619	AK6	Q9Y3D8	172 aa	Known RBP	4.27	□□□□□ -1.73
DNMT1-222	ENST00000590619	AP4S1	Q9Y587	144 aa		4.27	□□□□□ -1.73
DNMT1-222	ENST00000590619	LY96	Q9Y6Y9	160 aa		4.27	□□□□□ -1.73
DNMT1-222	ENST00000590619	TMEM272	A0A1B0GTI8	110 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619		M0R2Z0	102 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	SOCS3	O14543	225 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	PSCA	O43653	123 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	WBP4	O75554	376 aa	Known RBP	4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	IGLV2-8	P01709	118 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	HTN1	P15515	57 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	HIST1H1D	P16402	221 aa	Known RBP	4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	MYL12A	P19105	171 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	CALB2	P22676	271 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	DTYMK	P23919	212 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	UCP1	P25874	307 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	G6PC	P35575	357 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	ID1	P41134	155 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	LPAR6	P43657	344 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	RPL37A	P61513	92 aa	Known RBP	4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	ERH	P84090	104 aa	Known RBP	4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	DHODH	Q02127	395 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	SPINK13	Q1W4C9	94 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	LINC01620	Q4KN68	170 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619		Q6ZRU5	148 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	OR51H1	Q8NH63	302 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619		Q8WTZ3	238 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	CENPN	Q96H22	339 aa	Predicted RBP	4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	TMEM80	Q96HE8	168 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	C20orf173	Q96LM9	149 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	PLGRKT	Q9HBL7	147 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	COMMD9	Q9P000	198 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	CRCT1	Q9UGL9	99 aa		4.26	□□□□□ -1.73
DNMT1-222	ENST00000590619	TRAV12-2	A0A075B6T6	113 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	GAGE12B	A1L429	117 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619		K7EP13	123 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	GAGE7	O76087	117 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	GAGE12F	P0CL80	117 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	GAGE12G	P0CL81	117 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	GAGE12I	P0CL82	117 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	PTHLH	P12272	177 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	FCGR2C	P31995	323 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	PSMB3	P49720	205 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	TAS2R60	P59551	318 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	ERVK-16	P61578	105 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	CATR1	Q13166	79 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	RAB11B	Q15907	218 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	HSD17B12	Q53GQ0	312 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	ZNF818P	Q6ZRF7	136 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	TMEM144	Q7Z5S9	345 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	GPR141	Q7Z602	305 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	BAP18	Q8IXM2	172 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	OR11H7	Q8NGC8	314 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	FCAMR	Q8WWV6	532 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	C16orf74	Q96GX8	76 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	SLC5A7	Q9GZV3	580 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	DOK5	Q9P104	306 aa		4.25	□□□□□ -1.73
DNMT1-222	ENST00000590619	TRAV30	A0A087WSZ9	112 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	LOC100130705	A0A1B0GUX0	176 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	EI24	O14681	340 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	PGLYRP1	O75594	196 aa	Predicted RBP	4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	ADAP1	O75689	374 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	INS	P01308	110 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	UCHL1	P09936	223 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	EVI2A	P22794	236 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	GADD45A	P24522	165 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	F2R	P25116	425 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	ETV6	P41212	452 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	WNT4	P56705	351 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	YPEL3	P61236	119 aa	Predicted RBP	4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	HSPE1	P61604	102 aa	Known RBP	4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	PRCD	Q00LT1	54 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	WFDC2	Q14508	124 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	CDNF	Q49AH0	187 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	AADACL3	Q5VUY0	350 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	ZNF493	Q6ZR52	646 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	WFDC10B	Q8IUB3	73 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	CMTM1	Q8IZ96	169 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	MS4A15	Q8N5U1	240 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	OR6F1	Q8NGZ6	308 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	COQ8A	Q8NI60	647 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	RNASE8	Q8TDE3	154 aa	Known RBP	4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	GPR146	Q96CH1	333 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	LINC00467	Q9BRT7	94 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	ANXA10	Q9UJ72	324 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	ORC6	Q9Y5N6	252 aa		4.24	□□□□□ -1.73
DNMT1-222	ENST00000590619	IRGM	A1A4Y4	181 aa		4.23	□□□□□ -1.73
DNMT1-222	ENST00000590619	EFCAB10	A6NFE3	127 aa		4.23	□□□□□ -1.73
DNMT1-222	ENST00000590619	ZNF98	A6NK75	572 aa		4.23	□□□□□ -1.73
DNMT1-222	ENST00000590619	PPY	P01298	95 aa		4.23	□□□□□ -1.73
DNMT1-222	ENST00000590619	IL4	P05112	153 aa		4.23	□□□□□ -1.73
DNMT1-222	ENST00000590619	IGLC1	P0CG04	106 aa		4.23	□□□□□ -1.73
DNMT1-222	ENST00000590619	SNCA	P37840	140 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms