RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 C20orf85Q9H1P6 137 aa13.56□□□□□ -0.24
DDX39A-212ENST00000590260 RETNQ9HD89 108 aa13.56□□□□□ -0.24
DDX39A-212ENST00000590260 CACFD1Q9UGQ2 172 aa13.56□□□□□ -0.24
DDX39A-212ENST00000590260 UBQLN2Q9UHD9 624 aa13.56□□□□□ -0.24
DDX39A-212ENST00000590260 IGHV3-66A0A0C4DH42 116 aa13.55□□□□□ -0.24
DDX39A-212ENST00000590260 RPS10-NUDT3A0A1W2PQS6 291 aa13.55□□□□□ -0.24
DDX39A-212ENST00000590260 CENPXA8MT69 81 aa13.55□□□□□ -0.24
DDX39A-212ENST00000590260 FAM90A26D6RGX4 464 aa13.55□□□□□ -0.24
DDX39A-212ENST00000590260 PRSS46E5RG02 174 aa13.55□□□□□ -0.24
DDX39A-212ENST00000590260 SLC25A4P12235 298 aa13.55□□□□□ -0.24
DDX39A-212ENST00000590260 SLC16A13Q7RTY0 426 aa13.55□□□□□ -0.24
DDX39A-212ENST00000590260 NPIPB3Q92617 1050 aa13.55□□□□□ -0.24
DDX39A-212ENST00000590260 CCDC32Q9BV29 185 aa13.55□□□□□ -0.24
DDX39A-212ENST00000590260 KMT2CQ8NEZ4 4911 aaKnown RBP13.54□□□□□ -0.24
DDX39A-212ENST00000590260 IGKV1D-37A0A075B6S9 117 aa13.54□□□□□ -0.24
DDX39A-212ENST00000590260 CRYBB3P26998 211 aa13.54□□□□□ -0.24
DDX39A-212ENST00000590260 OR10J1P30954 320 aa13.54□□□□□ -0.24
DDX39A-212ENST00000590260 IFITM3Q01628 133 aa13.54□□□□□ -0.24
DDX39A-212ENST00000590260 OR4D5Q8NGN0 318 aa13.54□□□□□ -0.24
DDX39A-212ENST00000590260 OR1S2Q8NGQ3 325 aa13.54□□□□□ -0.24
DDX39A-212ENST00000590260 ACY3Q96HD9 319 aa13.54□□□□□ -0.24
DDX39A-212ENST00000590260 PIGBOS1A0A0B4J2F0 54 aa13.53□□□□□ -0.24
DDX39A-212ENST00000590260 SYNGR2O43760 224 aa13.53□□□□□ -0.24
DDX39A-212ENST00000590260 TCRBP04435 133 aa13.53□□□□□ -0.24
DDX39A-212ENST00000590260 YPEL3P61236 119 aaPredicted RBP13.53□□□□□ -0.24
DDX39A-212ENST00000590260 ID3Q02535 119 aa13.53□□□□□ -0.24
DDX39A-212ENST00000590260 GAMTQ14353 236 aa13.53□□□□□ -0.24
DDX39A-212ENST00000590260 ZNF124Q15973 351 aa13.53□□□□□ -0.24
DDX39A-212ENST00000590260 LAMTOR1Q6IAA8 161 aa13.53□□□□□ -0.24
DDX39A-212ENST00000590260 MITD1Q8WV92 249 aa13.53□□□□□ -0.24
DDX39A-212ENST00000590260 GINS3Q9BRX5 216 aa13.53□□□□□ -0.24
DDX39A-212ENST00000590260 U3KQE9 123 aa13.53□□□□□ -0.24
DDX39A-212ENST00000590260 IGKV3-7A0A075B6H7 116 aa13.52□□□□□ -0.25
DDX39A-212ENST00000590260 TRAV30A0A087WSZ9 112 aa13.52□□□□□ -0.25
DDX39A-212ENST00000590260 WRBO00258 174 aa13.52□□□□□ -0.25
DDX39A-212ENST00000590260 DFFBO76075 338 aa13.52□□□□□ -0.25
DDX39A-212ENST00000590260 USF2Q15853 346 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-212ENST00000590260 C4orf46Q504U0 113 aa13.52□□□□□ -0.25
DDX39A-212ENST00000590260 TCF24Q7RTU0 167 aa13.52□□□□□ -0.25
DDX39A-212ENST00000590260 ZMAT4Q9H898 229 aa13.52□□□□□ -0.25
DDX39A-212ENST00000590260 EDA2RQ9HAV5 297 aa13.52□□□□□ -0.25
DDX39A-212ENST00000590260 PTTG2Q9NZH5 202 aa13.52□□□□□ -0.25
DDX39A-212ENST00000590260 TRAV6A0A075B6T7 132 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 IGKV1OR2-108A0A075B7D4 117 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 IFNA4P05014 189 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 PAX9P55771 341 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 ATP5IP56385 69 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-212ENST00000590260 POLR2GP62487 172 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDX39A-212ENST00000590260 ETFRF1Q6IPR1 90 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 NOXA1Q86UR1 476 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 GBGT1Q8N5D6 347 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 FAM24BQ8N5W8 94 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 COQ8AQ8NI60 647 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 FAM110AQ9BQ89 295 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 SPATA25Q9BR10 227 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 SEC22CQ9BRL7 303 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 NBEAL2Q6ZNJ1 2754 aa13.51□□□□□ -0.25
DDX39A-212ENST00000590260 OR4C46A6NHA9 309 aa13.5□□□□□ -0.25
DDX39A-212ENST00000590260 TOMM40O96008 361 aa13.5□□□□□ -0.25
DDX39A-212ENST00000590260 PSG1P11464 419 aa13.5□□□□□ -0.25
DDX39A-212ENST00000590260 NPPCP23582 126 aa13.5□□□□□ -0.25
DDX39A-212ENST00000590260 GPX4P36969 197 aaPredicted RBP13.5□□□□□ -0.25
DDX39A-212ENST00000590260 TFPI2P48307 235 aa13.5□□□□□ -0.25
DDX39A-212ENST00000590260 ZNF90Q03938 601 aa13.5□□□□□ -0.25
DDX39A-212ENST00000590260 S100ZQ8WXG8 99 aa13.5□□□□□ -0.25
DDX39A-212ENST00000590260 NUDT15Q9NV35 164 aa13.5□□□□□ -0.25
DDX39A-212ENST00000590260 PMS2P5A8MQ11 134 aa13.49□□□□□ -0.25
DDX39A-212ENST00000590260 H3BP45 60 aa13.49□□□□□ -0.25
DDX39A-212ENST00000590260 APRG1Q8IVJ8 170 aa13.49□□□□□ -0.25
DDX39A-212ENST00000590260 STPG3Q8N7X2 389 aa13.49□□□□□ -0.25
DDX39A-212ENST00000590260 MS4A6AQ9H2W1 248 aa13.49□□□□□ -0.25
DDX39A-212ENST00000590260 MAP6D1Q9H9H5 199 aa13.49□□□□□ -0.25
DDX39A-212ENST00000590260 CCSO14618 274 aa13.48□□□□□ -0.25
DDX39A-212ENST00000590260 MED6O75586 246 aa13.48□□□□□ -0.25
DDX39A-212ENST00000590260 CCNKO75909 580 aa13.48□□□□□ -0.25
DDX39A-212ENST00000590260 ASAH1Q13510 395 aa13.48□□□□□ -0.25
DDX39A-212ENST00000590260 ZBTB8BQ8NAP8 495 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-212ENST00000590260 Q8WTZ3 238 aa13.48□□□□□ -0.25
DDX39A-212ENST00000590260 METTL26Q96S19 204 aa13.48□□□□□ -0.25
DDX39A-212ENST00000590260 GGTLC1Q9BX51 225 aa13.48□□□□□ -0.25
DDX39A-212ENST00000590260 STARD9Q9P2P6 4700 aa13.47□□□□□ -0.25
DDX39A-212ENST00000590260 CSMD3Q7Z407 3707 aa13.47□□□□□ -0.25
DDX39A-212ENST00000590260 LOC102724200A0A096LPH7 203 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-212ENST00000590260 UPK1BO75841 260 aa13.47□□□□□ -0.25
DDX39A-212ENST00000590260 IL4P05112 153 aa13.47□□□□□ -0.25
DDX39A-212ENST00000590260 NKX2-1P43699 371 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-212ENST00000590260 P2RY1P47900 373 aa13.47□□□□□ -0.25
DDX39A-212ENST00000590260 SPANXN5Q5MJ07 72 aa13.47□□□□□ -0.25
DDX39A-212ENST00000590260 C16orf54Q6UWD8 224 aa13.47□□□□□ -0.25
DDX39A-212ENST00000590260 THAP8Q8NA92 274 aa13.47□□□□□ -0.25
DDX39A-212ENST00000590260 GLMPQ8WWB7 406 aa13.47□□□□□ -0.25
DDX39A-212ENST00000590260 CIB3Q96Q77 187 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-212ENST00000590260 RCL1Q9Y2P8 373 aaKnown RBP13.47□□□□□ -0.25
DDX39A-212ENST00000590260 HNRNPCP07910 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
DDX39A-212ENST00000590260 H2AFB2P0C5Z0 115 aa13.46□□□□□ -0.25
DDX39A-212ENST00000590260 RD3LP0DJH9 198 aa13.46□□□□□ -0.25
DDX39A-212ENST00000590260 RAB11AP62491 216 aa13.46□□□□□ -0.25
DDX39A-212ENST00000590260 IAH1Q2TAA2 248 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-212ENST00000590260 WFDC3Q8IUB2 231 aa13.46□□□□□ -0.25
DDX39A-212ENST00000590260 OR51G1Q8NGK1 321 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms