RNA–Protein interactions for RNA: ENST00000590238.1

APBA3-206, Transcript of amyloid beta precursor protein binding family A member 3, human

TSL 5

Gene APBA3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBA3-206	ENST00000590238	RNF2	Q99496	336 aa		12.03	□□□□□ -0.48
APBA3-206	ENST00000590238	PAIP2B	Q9ULR5	123 aa	Known RBP	12.03	□□□□□ -0.48
APBA3-206	ENST00000590238	TMED3	Q9Y3Q3	217 aa		12.03	□□□□□ -0.48
APBA3-206	ENST00000590238		U3KQ87	197 aa		12.03	□□□□□ -0.48
APBA3-206	ENST00000590238	TRAV30	A0A087WSZ9	112 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	IGHV3-66	A0A0C4DH42	116 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	TSPAN4	O14817	238 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	OR4E1	P0C645	316 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	SLC25A4	P12235	298 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	BTC	P35070	178 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	TFPI2	P48307	235 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	CNPY1	Q3B7I2	92 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	GGNBP1	Q5YKI7	109 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	PRSS54	Q6PEW0	395 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	COQ8A	Q8NI60	647 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	SPAG8	Q99932	426 aa	Predicted RBP	12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	UBQLN2	Q9UHD9	624 aa		12.02	□□□□□ -0.49
APBA3-206	ENST00000590238	LYRM1	O43325	122 aa		12.01	□□□□□ -0.49
APBA3-206	ENST00000590238	PITX3	O75364	302 aa		12.01	□□□□□ -0.49
APBA3-206	ENST00000590238	BMI1	P35226	326 aa		12.01	□□□□□ -0.49
APBA3-206	ENST00000590238	LINC00322	Q6ZN03	302 aa	Predicted RBP	12.01	□□□□□ -0.49
APBA3-206	ENST00000590238	LYG2	Q86SG7	212 aa		12.01	□□□□□ -0.49
APBA3-206	ENST00000590238	FAM110A	Q9BQ89	295 aa		12.01	□□□□□ -0.49
APBA3-206	ENST00000590238	MAGT1	Q9H0U3	335 aa		12.01	□□□□□ -0.49
APBA3-206	ENST00000590238	RBMY1B	A6NDE4	496 aa	Known RBP	12	□□□□□ -0.49
APBA3-206	ENST00000590238	RBMY1E	A6NEQ0	496 aa	Known RBP	12	□□□□□ -0.49
APBA3-206	ENST00000590238	OR4C46	A6NHA9	309 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	PLA2G10	O15496	165 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	MED6	O75586	246 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	ADAP1	O75689	374 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	APOH	P02749	345 aa	Predicted RBP	12	□□□□□ -0.49
APBA3-206	ENST00000590238	RBMY1D	P0C7P1	496 aa	Known RBP	12	□□□□□ -0.49
APBA3-206	ENST00000590238	SLC25A6	P12236	298 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	OR10J1	P30954	320 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	DHRS2	Q13268	280 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	GBGT1	Q8N5D6	347 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	OR1S2	Q8NGQ3	325 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	ST8SIA2	Q92186	375 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	NPIPB3	Q92617	1050 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	CCDC32	Q9BV29	185 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	ZFAND3	Q9H8U3	227 aa		12	□□□□□ -0.49
APBA3-206	ENST00000590238	EPPK1	P58107	5090 aa	Known RBP	11.99	□□□□□ -0.49
APBA3-206	ENST00000590238		A6NHS1	94 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	FAM90A26	D6RGX4	464 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	WRB	O00258	174 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	IFNA21	P01568	189 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	IGKV1-17	P01599	117 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	NPPC	P23582	126 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	RPL11	P62913	178 aa	Known RBP	11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	TCF24	Q7RTU0	167 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238		Q8WTZ3	238 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	S100Z	Q8WXG8	99 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	METTL26	Q96S19	204 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	C20orf85	Q9H1P6	137 aa		11.99	□□□□□ -0.49
APBA3-206	ENST00000590238	TRAV6	A0A075B6T7	132 aa		11.98	□□□□□ -0.49
APBA3-206	ENST00000590238	SYNGR2	O43760	224 aa		11.98	□□□□□ -0.49
APBA3-206	ENST00000590238	IGLC1	P0CG04	106 aa		11.98	□□□□□ -0.49
APBA3-206	ENST00000590238	RAB11A	P62491	216 aa		11.98	□□□□□ -0.49
APBA3-206	ENST00000590238	WFDC3	Q8IUB2	231 aa		11.98	□□□□□ -0.49
APBA3-206	ENST00000590238	NARS2	Q96I59	477 aa	Known RBP	11.98	□□□□□ -0.49
APBA3-206	ENST00000590238	SLC35E1	Q96K37	410 aa		11.98	□□□□□ -0.49
APBA3-206	ENST00000590238	TMEM231	Q9H6L2	316 aa		11.98	□□□□□ -0.49
APBA3-206	ENST00000590238	HYDIN	Q4G0P3	5121 aa		11.97	□□□□□ -0.49
APBA3-206	ENST00000590238	DNASE2	O00115	360 aa	Predicted RBP	11.97	□□□□□ -0.49
APBA3-206	ENST00000590238	DFFB	O76075	338 aa		11.97	□□□□□ -0.49
APBA3-206	ENST00000590238	ATP5I	P56385	69 aa	Predicted RBP	11.97	□□□□□ -0.49
APBA3-206	ENST00000590238	PAFAH1B2	P68402	229 aa		11.97	□□□□□ -0.49
APBA3-206	ENST00000590238	RPP30	P78346	268 aa	Known RBP	11.97	□□□□□ -0.49
APBA3-206	ENST00000590238	LILRB2	Q8N423	598 aa		11.97	□□□□□ -0.49
APBA3-206	ENST00000590238	CIB3	Q96Q77	187 aa	Predicted RBP	11.97	□□□□□ -0.49
APBA3-206	ENST00000590238	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.96	□□□□□ -0.49
APBA3-206	ENST00000590238		A0A1W2PS18	150 aa		11.96	□□□□□ -0.49
APBA3-206	ENST00000590238	ZFP92	A6NM28	416 aa		11.96	□□□□□ -0.49
APBA3-206	ENST00000590238	MPTX1	A8MV57	137 aa		11.96	□□□□□ -0.49
APBA3-206	ENST00000590238	SCGB1D2	O95969	90 aa		11.96	□□□□□ -0.49
APBA3-206	ENST00000590238	TCRB	P04435	133 aa		11.96	□□□□□ -0.49
APBA3-206	ENST00000590238	RD3L	P0DJH9	198 aa		11.96	□□□□□ -0.49
APBA3-206	ENST00000590238	YPEL3	P61236	119 aa	Predicted RBP	11.96	□□□□□ -0.49
APBA3-206	ENST00000590238	SPANXN5	Q5MJ07	72 aa		11.96	□□□□□ -0.49
APBA3-206	ENST00000590238	LINC00299	Q6ZSB3	139 aa		11.96	□□□□□ -0.49
APBA3-206	ENST00000590238	GGTLC1	Q9BX51	225 aa		11.96	□□□□□ -0.49
APBA3-206	ENST00000590238	VSIR	Q9H7M9	311 aa		11.96	□□□□□ -0.49
APBA3-206	ENST00000590238		H3BP45	60 aa		11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	IL4	P05112	153 aa		11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	CD5	P06127	495 aa		11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	GPX4	P36969	197 aa	Predicted RBP	11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	POLR2G	P62487	172 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	GAMT	Q14353	236 aa		11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	ODF3L2	Q3SX64	289 aa		11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	FAM90A2P	Q658T7	463 aa		11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	MZT2B	Q6NZ67	158 aa		11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	NUDT15	Q9NV35	164 aa		11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	GSKIP	Q9P0R6	139 aa		11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	RABAC1	Q9UI14	185 aa		11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	PLEC	Q15149	4684 aa	Known RBP	11.95	□□□□□ -0.5
APBA3-206	ENST00000590238	FAM240B	A0A1B0GVZ2	78 aa		11.94	□□□□□ -0.5
APBA3-206	ENST00000590238	SSSCA1	O60232	199 aa		11.94	□□□□□ -0.5
APBA3-206	ENST00000590238	TOMM40	O96008	361 aa		11.94	□□□□□ -0.5
APBA3-206	ENST00000590238	CRYBB3	P26998	211 aa		11.94	□□□□□ -0.5
APBA3-206	ENST00000590238	NKX2-1	P43699	371 aa	Predicted RBP	11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms