RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 RCL1Q9Y2P8 373 aaKnown RBP16.16■□□□□ 0.18
ATG4D-212ENST00000590096 LSM5Q9Y4Y9 91 aaKnown RBP16.16■□□□□ 0.18
ATG4D-212ENST00000590096 SORL1Q92673 2214 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 WI2-2373I1.2A0A1W2PRP0 233 aa16.15■□□□□ 0.18
ATG4D-212ENST00000590096 OR10J1P30954 320 aa16.15■□□□□ 0.18
ATG4D-212ENST00000590096 NPIPB3Q92617 1050 aa16.15■□□□□ 0.18
ATG4D-212ENST00000590096 GINS3Q9BRX5 216 aa16.15■□□□□ 0.18
ATG4D-212ENST00000590096 PUS1Q9Y606 427 aaKnown RBP eCLIP16.15■□□□□ 0.18
ATG4D-212ENST00000590096 K7EMT4 169 aa16.14■□□□□ 0.17
ATG4D-212ENST00000590096 L7N2F9 121 aa16.14■□□□□ 0.17
ATG4D-212ENST00000590096 ZNF207O43670 478 aaKnown RBP16.14■□□□□ 0.17
ATG4D-212ENST00000590096 GP9P14770 177 aa16.14■□□□□ 0.17
ATG4D-212ENST00000590096 TAS2R30P59541 319 aa16.14■□□□□ 0.17
ATG4D-212ENST00000590096 S100A10P60903 97 aa16.14■□□□□ 0.17
ATG4D-212ENST00000590096 VAMP2P63027 116 aa16.14■□□□□ 0.17
ATG4D-212ENST00000590096 TIGITQ495A1 244 aa16.14■□□□□ 0.17
ATG4D-212ENST00000590096 K7EIL1 84 aa16.13■□□□□ 0.17
ATG4D-212ENST00000590096 K7EPK0 472 aa16.13■□□□□ 0.17
ATG4D-212ENST00000590096 TSC22D2O75157 780 aa16.13■□□□□ 0.17
ATG4D-212ENST00000590096 IGKV1-17P01599 117 aa16.13■□□□□ 0.17
ATG4D-212ENST00000590096 IGLC1P0CG04 106 aa16.13■□□□□ 0.17
ATG4D-212ENST00000590096 C8orf88P0DMB2 117 aa16.13■□□□□ 0.17
ATG4D-212ENST00000590096 GAMTQ14353 236 aa16.13■□□□□ 0.17
ATG4D-212ENST00000590096 DEFB114Q30KQ6 69 aa16.13■□□□□ 0.17
ATG4D-212ENST00000590096 CD300EQ496F6 205 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-212ENST00000590096 TOMM20LQ6UXN7 152 aa16.13■□□□□ 0.17
ATG4D-212ENST00000590096 ZNF414Q96IQ9 312 aa16.13■□□□□ 0.17
ATG4D-212ENST00000590096 PVALBP20472 110 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-212ENST00000590096 PAX9P55771 341 aa16.12■□□□□ 0.17
ATG4D-212ENST00000590096 RGS21Q2M5E4 152 aa16.12■□□□□ 0.17
ATG4D-212ENST00000590096 BTNL8Q6UX41 500 aa16.12■□□□□ 0.17
ATG4D-212ENST00000590096 MLXQ9UH92 298 aa16.12■□□□□ 0.17
ATG4D-212ENST00000590096 TRAV14DV4A0A0A6YYC5 116 aa16.11■□□□□ 0.17
ATG4D-212ENST00000590096 C7orf66A4D0T2 115 aa16.11■□□□□ 0.17
ATG4D-212ENST00000590096 SIX6O95475 246 aa16.11■□□□□ 0.17
ATG4D-212ENST00000590096 YPEL3P61236 119 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-212ENST00000590096 OR8G2PQ6IF36 304 aa16.11■□□□□ 0.17
ATG4D-212ENST00000590096 Q8WTZ3 238 aa16.11■□□□□ 0.17
ATG4D-212ENST00000590096 ZFP92A6NM28 416 aa16.1■□□□□ 0.17
ATG4D-212ENST00000590096 PRSS46E5RG02 174 aa16.1■□□□□ 0.17
ATG4D-212ENST00000590096 BCAP31P51572 246 aa16.1■□□□□ 0.17
ATG4D-212ENST00000590096 CYCSP99999 105 aaKnown RBP16.1■□□□□ 0.17
ATG4D-212ENST00000590096 RAB32Q13637 225 aa16.1■□□□□ 0.17
ATG4D-212ENST00000590096 DEFB121Q5J5C9 76 aa16.1■□□□□ 0.17
ATG4D-212ENST00000590096 TMEM14EPQ6UXP3 125 aa16.1■□□□□ 0.17
ATG4D-212ENST00000590096 ZFAND3Q9H8U3 227 aa16.1■□□□□ 0.17
ATG4D-212ENST00000590096 ALG5Q9Y673 324 aa16.1■□□□□ 0.17
ATG4D-212ENST00000590096 IGHV7-4-1A0A0J9YVY3 117 aa16.09■□□□□ 0.17
ATG4D-212ENST00000590096 IZUMO1RA6ND01 250 aa16.09■□□□□ 0.17
ATG4D-212ENST00000590096 METTL15P1P0C7V9 234 aa16.09■□□□□ 0.17
ATG4D-212ENST00000590096 BMI1P35226 326 aa16.09■□□□□ 0.17
ATG4D-212ENST00000590096 IL15RAQ13261 267 aa16.09■□□□□ 0.17
ATG4D-212ENST00000590096 ACOT7LQ6ZUV0 252 aa16.09■□□□□ 0.17
ATG4D-212ENST00000590096 NMES1Q9C002 83 aa16.09■□□□□ 0.17
ATG4D-212ENST00000590096 SMPXQ9UHP9 88 aa16.09■□□□□ 0.17
ATG4D-212ENST00000590096 SELENOKQ9Y6D0 94 aa16.09■□□□□ 0.17
ATG4D-212ENST00000590096 TOMM40O96008 361 aa16.08■□□□□ 0.16
ATG4D-212ENST00000590096 FABP1P07148 127 aa16.08■□□□□ 0.16
ATG4D-212ENST00000590096 RD3LP0DJH9 198 aa16.08■□□□□ 0.16
ATG4D-212ENST00000590096 CAV2P51636 162 aa16.08■□□□□ 0.16
ATG4D-212ENST00000590096 AKR1C1Q04828 323 aa16.08■□□□□ 0.16
ATG4D-212ENST00000590096 GUCA2BQ16661 112 aa16.08■□□□□ 0.16
ATG4D-212ENST00000590096 RBPMS2Q6ZRY4 209 aaKnown RBP16.08■□□□□ 0.16
ATG4D-212ENST00000590096 OR10P1Q8NGE3 313 aa16.08■□□□□ 0.16
ATG4D-212ENST00000590096 METTL26Q96S19 204 aa16.08■□□□□ 0.16
ATG4D-212ENST00000590096 RHPN1-AS1Q9BWJ2 59 aa16.08■□□□□ 0.16
ATG4D-212ENST00000590096 MGAT4CQ9UBM8 478 aa16.08■□□□□ 0.16
ATG4D-212ENST00000590096 SMCO3A2RU48 225 aa16.07■□□□□ 0.16
ATG4D-212ENST00000590096 PMS2P5A8MQ11 134 aa16.07■□□□□ 0.16
ATG4D-212ENST00000590096 LAMTOR1Q6IAA8 161 aa16.07■□□□□ 0.16
ATG4D-212ENST00000590096 GTSCR1Q86UQ5 136 aa16.07■□□□□ 0.16
ATG4D-212ENST00000590096 TMEM61Q8N0U2 210 aa16.07■□□□□ 0.16
ATG4D-212ENST00000590096 WDR89Q96FK6 387 aaPredicted RBP16.07■□□□□ 0.16
ATG4D-212ENST00000590096 IGHV3-49A0A0A0MS15 119 aa16.06■□□□□ 0.16
ATG4D-212ENST00000590096 TRAV25A0A0B4J276 109 aa16.06■□□□□ 0.16
ATG4D-212ENST00000590096 CHEK1O14757 476 aa16.06■□□□□ 0.16
ATG4D-212ENST00000590096 CCNKO75909 580 aa16.06■□□□□ 0.16
ATG4D-212ENST00000590096 RLN2P04090 185 aa16.06■□□□□ 0.16
ATG4D-212ENST00000590096 NPPCP23582 126 aa16.06■□□□□ 0.16
ATG4D-212ENST00000590096 THAP8Q8NA92 274 aa16.06■□□□□ 0.16
ATG4D-212ENST00000590096 NARS2Q96I59 477 aaKnown RBP16.06■□□□□ 0.16
ATG4D-212ENST00000590096 TMEM231Q9H6L2 316 aa16.06■□□□□ 0.16
ATG4D-212ENST00000590096 IGKV1D-37A0A075B6S9 117 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 IGHV3OR16-13A0A075B7E8 117 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 IGHV3-74A0A0B4J1X5 117 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 SCAF4O95104 1147 aaKnown RBP16.05■□□□□ 0.16
ATG4D-212ENST00000590096 IL4P05112 153 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 PSG1P11464 419 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 H2BFSP57053 126 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 RRAS2P62070 204 aaPredicted RBP16.05■□□□□ 0.16
ATG4D-212ENST00000590096 DLK1P80370 383 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 LRRC37A5PQ49AS3 106 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 OR51G1Q8NGK1 321 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 TRGV9Q99603 122 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 C11orf1Q9H5F2 150 aa16.05■□□□□ 0.16
ATG4D-212ENST00000590096 A0A1W2PS18 150 aa16.04■□□□□ 0.16
ATG4D-212ENST00000590096 ZNF785A8K8V0 405 aa16.04■□□□□ 0.16
ATG4D-212ENST00000590096 DEDDO75618 318 aa16.04■□□□□ 0.16
ATG4D-212ENST00000590096 ZNF90Q03938 601 aa16.04■□□□□ 0.16
ATG4D-212ENST00000590096 RNF2Q99496 336 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms