RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 DUXBA0A1W2PPF3 345 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 INS-IGF2F8WCM5 200 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 CHEK1O14757 476 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 GNG7O60262 68 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 CD5P06127 495 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 IFITM3Q01628 133 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 LRTM2Q8N967 370 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 OR52E5Q8NH55 327 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 RNF2Q99496 336 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 GINS3Q9BRX5 216 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 NUDT15Q9NV35 164 aa10.65□□□□□ -0.7
MBD1-220ENST00000589758 A0A1B0GU03 582 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 CORTO00230 105 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 ADAP1O75689 374 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 RNASE2P10153 161 aaKnown RBP10.64□□□□□ -0.71
MBD1-220ENST00000589758 NPBWR1P48145 328 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 SUB1P53999 127 aaKnown RBP eCLIP10.64□□□□□ -0.71
MBD1-220ENST00000589758 PAFAH1B2P68402 229 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 TNFRSF9Q07011 255 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 ASAH1Q13510 395 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 AARDQ4LEZ3 155 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 GGNBP1Q5YKI7 109 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 DUSP18Q8NEJ0 188 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 COQ8AQ8NI60 647 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 ZNF414Q96IQ9 312 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 RBKSQ9H477 322 aa10.64□□□□□ -0.71
MBD1-220ENST00000589758 H2AFB2P0C5Z0 115 aa10.63□□□□□ -0.71
MBD1-220ENST00000589758 DEFB135Q30KP9 77 aa10.63□□□□□ -0.71
MBD1-220ENST00000589758 ENKURQ8TC29 256 aa10.63□□□□□ -0.71
MBD1-220ENST00000589758 RNF183Q96D59 192 aa10.63□□□□□ -0.71
MBD1-220ENST00000589758 MAP6D1Q9H9H5 199 aa10.63□□□□□ -0.71
MBD1-220ENST00000589758 TMED3Q9Y3Q3 217 aa10.63□□□□□ -0.71
MBD1-220ENST00000589758 A0A0J9YWU9 116 aa10.62□□□□□ -0.71
MBD1-220ENST00000589758 RPL35AP18077 110 aaKnown RBP10.62□□□□□ -0.71
MBD1-220ENST00000589758 ATF4P18848 351 aaPredicted RBP10.62□□□□□ -0.71
MBD1-220ENST00000589758 FAM90A2PQ658T7 463 aa10.62□□□□□ -0.71
MBD1-220ENST00000589758 PVRIGQ6DKI7 326 aa10.62□□□□□ -0.71
MBD1-220ENST00000589758 TOMM20LQ6UXN7 152 aa10.62□□□□□ -0.71
MBD1-220ENST00000589758 TMEM217Q8N7C4 229 aa10.62□□□□□ -0.71
MBD1-220ENST00000589758 SEC22CQ9BRL7 303 aa10.62□□□□□ -0.71
MBD1-220ENST00000589758 HSPB7Q9UBY9 170 aa10.62□□□□□ -0.71
MBD1-220ENST00000589758 IGHV3-49A0A0A0MS15 119 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 CXorf65A6NEN9 183 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 NUPR2A6NF83 97 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 MPTX1A8MV57 137 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 SCGB2A1O75556 95 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 IFNA10P01566 189 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 IFNA21P01568 189 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 IAPPP10997 89 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 OPRK1P41145 380 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 HTR2BP41595 481 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 TFPI2P48307 235 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 MLANAQ16655 118 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 ZNF600Q6ZNG1 722 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 TCF24Q7RTU0 167 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 DTD1Q8TEA8 209 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 MAGT1Q9H0U3 335 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 TMEM231Q9H6L2 316 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 CACFD1Q9UGQ2 172 aa10.61□□□□□ -0.71
MBD1-220ENST00000589758 IGKV3-7A0A075B6H7 116 aa10.6□□□□□ -0.71
MBD1-220ENST00000589758 PITX3O75364 302 aa10.6□□□□□ -0.71
MBD1-220ENST00000589758 TMEM50AO95807 157 aa10.6□□□□□ -0.71
MBD1-220ENST00000589758 SLC25A6P12236 298 aa10.6□□□□□ -0.71
MBD1-220ENST00000589758 NPY1RP25929 384 aa10.6□□□□□ -0.71
MBD1-220ENST00000589758 C2orf83Q53S99 150 aa10.6□□□□□ -0.71
MBD1-220ENST00000589758 CSTL1Q9H114 145 aa10.6□□□□□ -0.71
MBD1-220ENST00000589758 VSIRQ9H7M9 311 aa10.6□□□□□ -0.71
MBD1-220ENST00000589758 PUS1Q9Y606 427 aaKnown RBP eCLIP10.6□□□□□ -0.71
MBD1-220ENST00000589758 IGHV3OR16-13A0A075B7E8 117 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 IGHV3-74A0A0B4J1X5 117 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 TRAV2A0A0B4J234 112 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 CCSO14618 274 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 DEFA1P59665 94 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 DEFA3P59666 94 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 PMS2P11Q13670 270 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 BSXQ3C1V8 233 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 NRARPQ7Z6K4 114 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 GBGT1Q8N5D6 347 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 ZNF431Q8TF32 576 aaPredicted RBP10.59□□□□□ -0.71
MBD1-220ENST00000589758 MITD1Q8WV92 249 aa10.59□□□□□ -0.71
MBD1-220ENST00000589758 FNDC4Q9H6D8 234 aaPredicted RBP10.59□□□□□ -0.71
MBD1-220ENST00000589758 PAIP2BQ9ULR5 123 aaKnown RBP10.59□□□□□ -0.71
MBD1-220ENST00000589758 TRAV30A0A087WSZ9 112 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 A0A1W2PS18 150 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 DNASE2O00115 360 aaPredicted RBP10.58□□□□□ -0.72
MBD1-220ENST00000589758 WRBO00258 174 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 CLN5O75503 358 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 MED6O75586 246 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 DFFBO76075 338 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 SCGB1D2O95969 90 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 C12orf45Q8N5I9 185 aaPredicted RBP10.58□□□□□ -0.72
MBD1-220ENST00000589758 OR4X1Q8NH49 305 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 GATAD1Q8WUU5 269 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 TMEM170AQ8WVE7 144 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 ST8SIA2Q92186 375 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
MBD1-220ENST00000589758 MRPL36Q9P0J6 103 aaKnown RBP10.58□□□□□ -0.72
MBD1-220ENST00000589758 GSKIPQ9P0R6 139 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms