RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 HSPA13P48723 471 aa12.67□□□□□ -0.38
CXXC1-211ENST00000589548 HOXA1P49639 335 aaPredicted RBP12.67□□□□□ -0.38
CXXC1-211ENST00000589548 SUB1P53999 127 aaKnown RBP eCLIP12.67□□□□□ -0.38
CXXC1-211ENST00000589548 SNRPD3P62318 126 aaKnown RBP12.67□□□□□ -0.38
CXXC1-211ENST00000589548 TMEM69Q5SWH9 247 aa12.67□□□□□ -0.38
CXXC1-211ENST00000589548 LPCAT3Q6P1A2 487 aa12.67□□□□□ -0.38
CXXC1-211ENST00000589548 FCGR1BQ92637 280 aa12.67□□□□□ -0.38
CXXC1-211ENST00000589548 S100A16Q96FQ6 103 aaKnown RBP12.67□□□□□ -0.38
CXXC1-211ENST00000589548 NRN1Q9NPD7 142 aa12.67□□□□□ -0.38
CXXC1-211ENST00000589548 A0A0G2JRQ6 117 aa12.66□□□□□ -0.38
CXXC1-211ENST00000589548 IGKV3-20P01619 116 aa12.66□□□□□ -0.38
CXXC1-211ENST00000589548 AP2S1P53680 142 aaPredicted RBP12.66□□□□□ -0.38
CXXC1-211ENST00000589548 UCP3P55916 312 aa12.66□□□□□ -0.38
CXXC1-211ENST00000589548 TSPAN5P62079 268 aa12.66□□□□□ -0.38
CXXC1-211ENST00000589548 OXA1LQ15070 435 aa12.66□□□□□ -0.38
CXXC1-211ENST00000589548 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
CXXC1-211ENST00000589548 ZNF709Q8N972 641 aa12.66□□□□□ -0.38
CXXC1-211ENST00000589548 SEPSECSQ9HD40 501 aaKnown RBP12.66□□□□□ -0.38
CXXC1-211ENST00000589548 TRAV30A0A087WSZ9 112 aa12.65□□□□□ -0.38
CXXC1-211ENST00000589548 PRSS3P35030 304 aa12.65□□□□□ -0.38
CXXC1-211ENST00000589548 TGFBR1P36897 503 aa12.65□□□□□ -0.38
CXXC1-211ENST00000589548 DHODHQ02127 395 aa12.65□□□□□ -0.38
CXXC1-211ENST00000589548 PRSS54Q6PEW0 395 aa12.65□□□□□ -0.38
CXXC1-211ENST00000589548 OR1S2Q8NGQ3 325 aa12.65□□□□□ -0.38
CXXC1-211ENST00000589548 GPX8Q8TED1 209 aa12.65□□□□□ -0.38
CXXC1-211ENST00000589548 TP53RKQ96S44 253 aa12.65□□□□□ -0.38
CXXC1-211ENST00000589548 TEX48A0A1B0GUV7 120 aa12.64□□□□□ -0.39
CXXC1-211ENST00000589548 BUB3O43684 328 aa12.64□□□□□ -0.39
CXXC1-211ENST00000589548 SCGB2A1O75556 95 aa12.64□□□□□ -0.39
CXXC1-211ENST00000589548 NKX2-1P43699 371 aaPredicted RBP12.64□□□□□ -0.39
CXXC1-211ENST00000589548 RND2P52198 227 aa12.64□□□□□ -0.39
CXXC1-211ENST00000589548 AKR1C2P52895 323 aa12.64□□□□□ -0.39
CXXC1-211ENST00000589548 SIGLEC15Q6ZMC9 328 aa12.64□□□□□ -0.39
CXXC1-211ENST00000589548 SAMD12Q8N8I0 201 aa12.64□□□□□ -0.39
CXXC1-211ENST00000589548 YTHDF1Q9BYJ9 559 aaKnown RBP12.64□□□□□ -0.39
CXXC1-211ENST00000589548 YTHDF2Q9Y5A9 579 aaKnown RBP12.64□□□□□ -0.39
CXXC1-211ENST00000589548 TMEM127O75204 238 aa12.63□□□□□ -0.39
CXXC1-211ENST00000589548 IL4P05112 153 aa12.63□□□□□ -0.39
CXXC1-211ENST00000589548 PI3P19957 117 aa12.63□□□□□ -0.39
CXXC1-211ENST00000589548 YPEL3P61236 119 aaPredicted RBP12.63□□□□□ -0.39
CXXC1-211ENST00000589548 RND3P61587 244 aa12.63□□□□□ -0.39
CXXC1-211ENST00000589548 C1orf158Q8N1D5 194 aa12.63□□□□□ -0.39
CXXC1-211ENST00000589548 Q8WTZ3 238 aa12.63□□□□□ -0.39
CXXC1-211ENST00000589548 PDCD10Q9BUL8 212 aa12.63□□□□□ -0.39
CXXC1-211ENST00000589548 SCRT2Q9NQ03 307 aa12.63□□□□□ -0.39
CXXC1-211ENST00000589548 NBDYA0A0U1RRE5 68 aa12.62□□□□□ -0.39
CXXC1-211ENST00000589548 NXPH3O95157 252 aa12.62□□□□□ -0.39
CXXC1-211ENST00000589548 OR10J1P30954 320 aa12.62□□□□□ -0.39
CXXC1-211ENST00000589548 FAM3BP58499 235 aaPredicted RBP12.62□□□□□ -0.39
CXXC1-211ENST00000589548 GSG1LQ6UXU4 331 aa12.62□□□□□ -0.39
CXXC1-211ENST00000589548 C6orf223Q8N319 242 aa12.62□□□□□ -0.39
CXXC1-211ENST00000589548 WDR12Q9GZL7 423 aaKnown RBP12.62□□□□□ -0.39
CXXC1-211ENST00000589548 SLC35B3Q9H1N7 401 aa12.62□□□□□ -0.39
CXXC1-211ENST00000589548 SAV1Q9H4B6 383 aaPredicted RBP12.62□□□□□ -0.39
CXXC1-211ENST00000589548 ENY2Q9NPA8 101 aa12.62□□□□□ -0.39
CXXC1-211ENST00000589548 RAB26Q9ULW5 256 aa12.62□□□□□ -0.39
CXXC1-211ENST00000589548 LOC102723971A0A1B0GUV8 181 aa12.61□□□□□ -0.39
CXXC1-211ENST00000589548 ZNRF2Q8NHG8 242 aa12.61□□□□□ -0.39
CXXC1-211ENST00000589548 TMEM170AQ8WVE7 144 aa12.61□□□□□ -0.39
CXXC1-211ENST00000589548 VCX3BQ9H321 246 aa12.61□□□□□ -0.39
CXXC1-211ENST00000589548 TMED3Q9Y3Q3 217 aa12.61□□□□□ -0.39
CXXC1-211ENST00000589548 RPS10-NUDT3A0A1W2PQS6 291 aa12.6□□□□□ -0.39
CXXC1-211ENST00000589548 M0QYG6 137 aa12.6□□□□□ -0.39
CXXC1-211ENST00000589548 PGAM2P15259 253 aa12.6□□□□□ -0.39
CXXC1-211ENST00000589548 PIGPP57054 158 aa12.6□□□□□ -0.39
CXXC1-211ENST00000589548 DAD1P61803 113 aa12.6□□□□□ -0.39
CXXC1-211ENST00000589548 FOXI2Q6ZQN5 318 aa12.6□□□□□ -0.39
CXXC1-211ENST00000589548 C15orf53Q8NAA6 179 aa12.6□□□□□ -0.39
CXXC1-211ENST00000589548 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
CXXC1-211ENST00000589548 SOCS3O14543 225 aa12.59□□□□□ -0.39
CXXC1-211ENST00000589548 TOMM40O96008 361 aa12.59□□□□□ -0.39
CXXC1-211ENST00000589548 HBE1P02100 147 aa12.59□□□□□ -0.39
CXXC1-211ENST00000589548 RPS19P39019 145 aaKnown RBP12.59□□□□□ -0.39
CXXC1-211ENST00000589548 ZNF79Q15937 498 aa12.59□□□□□ -0.39
CXXC1-211ENST00000589548 SP6Q3SY56 376 aa12.59□□□□□ -0.39
CXXC1-211ENST00000589548 AARDQ4LEZ3 155 aa12.59□□□□□ -0.39
CXXC1-211ENST00000589548 OR4B1Q8NGF8 309 aa12.59□□□□□ -0.39
CXXC1-211ENST00000589548 LINC00052Q96N35 136 aa12.59□□□□□ -0.39
CXXC1-211ENST00000589548 C3orf85A0A1B0GTC6 90 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 F6UB75 175 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 GSTZ1O43708 216 aaPredicted RBP12.58□□□□□ -0.4
CXXC1-211ENST00000589548 SLC25A4P12235 298 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 RCVRNP35243 200 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 HTR2BP41595 481 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 C2orf83Q53S99 150 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 SPATA12Q7Z6I5 190 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 LHFPL1Q86WI0 220 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 SNX29P2Q8IUI4 249 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 CROCCP3Q8IVE0 287 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 NPIPB3Q92617 1050 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 ZNF486Q96H40 463 aaPredicted RBP12.58□□□□□ -0.4
CXXC1-211ENST00000589548 ATG101Q9BSB4 218 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 GOLT1BQ9Y3E0 138 aa12.58□□□□□ -0.4
CXXC1-211ENST00000589548 PSG1P11464 419 aa12.57□□□□□ -0.4
CXXC1-211ENST00000589548 RORCP51449 518 aa12.57□□□□□ -0.4
CXXC1-211ENST00000589548 SPCS3P61009 180 aa12.57□□□□□ -0.4
CXXC1-211ENST00000589548 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
CXXC1-211ENST00000589548 TRIM16LQ309B1 348 aa12.57□□□□□ -0.4
CXXC1-211ENST00000589548 OR51G1Q8NGK1 321 aa12.57□□□□□ -0.4
CXXC1-211ENST00000589548 C7orf50Q9BRJ6 194 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms