RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 ZNF502Q8TBZ5 544 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 RNF114Q9Y508 228 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 IGKV1D-37A0A075B6S9 117 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 TRBV7-1A0A0A6YYK4 115 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 GPR183P32249 361 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 ZNF90Q03938 601 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 EIF5AL1Q6IS14 154 aaKnown RBP11.26□□□□□ -0.61
NPC1-207ENST00000588867 COMMD1Q8N668 190 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 THAP8Q8NA92 274 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 OR5B12Q96R08 314 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 F8W735 103 aaPredicted RBP11.25□□□□□ -0.61
NPC1-207ENST00000588867 SPP1P10451 314 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 GATA2P23769 480 aaPredicted RBP11.25□□□□□ -0.61
NPC1-207ENST00000588867 IFITM2Q01629 132 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 TIGITQ495A1 244 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 CCDC140Q96MF4 163 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 TXN2Q99757 166 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 GGTLC1Q9BX51 225 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 TRAV30A0A087WSZ9 112 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 TCRBV4S1A1TA0A5B7 111 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 ANKRD34BA5PLL1 514 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 SEC11BP0C7V7 166 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 IGLC1P0CG04 106 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 MIC13Q5XKP0 118 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 CYP2G1PQ6ZSU1 146 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 C11orf44Q8N8P7 122 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 ZNF680Q8NEM1 530 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 BPIFCQ8NFQ6 507 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 TRGV9Q99603 122 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 GNB4Q9HAV0 340 aa11.25□□□□□ -0.61
NPC1-207ENST00000588867 ELLP55199 621 aaPredicted RBP11.24□□□□□ -0.61
NPC1-207ENST00000588867 KIAA0141Q14154 515 aaPredicted RBP11.24□□□□□ -0.61
NPC1-207ENST00000588867 KHDC1LQ5JSQ8 128 aa11.24□□□□□ -0.61
NPC1-207ENST00000588867 FAM74A1Q5RGS3 127 aa11.24□□□□□ -0.61
NPC1-207ENST00000588867 TMEM182Q6ZP80 229 aaPredicted RBP11.24□□□□□ -0.61
NPC1-207ENST00000588867 ZNF491Q8N8L2 437 aa11.24□□□□□ -0.61
NPC1-207ENST00000588867 PHYHIPLQ96FC7 376 aa11.24□□□□□ -0.61
NPC1-207ENST00000588867 PSMG3Q9BT73 122 aaPredicted RBP11.24□□□□□ -0.61
NPC1-207ENST00000588867 GAR1Q9NY12 217 aaKnown RBP11.24□□□□□ -0.61
NPC1-207ENST00000588867 SLC45A2Q9UMX9 530 aa11.24□□□□□ -0.61
NPC1-207ENST00000588867 TIMM9Q9Y5J7 89 aa11.24□□□□□ -0.61
NPC1-207ENST00000588867 PXMP4Q9Y6I8 212 aa11.24□□□□□ -0.61
NPC1-207ENST00000588867 JMJD1CQ15652 2540 aa11.24□□□□□ -0.61
NPC1-207ENST00000588867 PPP5D1E7EU14 171 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 NUPL2O15504 423 aaKnown RBP11.23□□□□□ -0.61
NPC1-207ENST00000588867 SCGB2A1O75556 95 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 IFNA7P01567 189 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 IGKV1-17P01599 117 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 CTSGP08311 255 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 FCGR2BP31994 310 aaPredicted RBP11.23□□□□□ -0.61
NPC1-207ENST00000588867 HIST2H2BDQ6DRA6 164 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 STPG3Q8N7X2 389 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
NPC1-207ENST00000588867 RPL29P47914 159 aaKnown RBP11.23□□□□□ -0.61
NPC1-207ENST00000588867 B2MP61769 119 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 ZNF616Q08AN1 781 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 TCTEX1D4Q5JR98 221 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 FFAR4Q5NUL3 377 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 RNF152Q8N8N0 203 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 CHRDL1Q9BU40 450 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 C2CD3Q4AC94 2353 aa11.23□□□□□ -0.61
NPC1-207ENST00000588867 IGHV3-35A0A0C4DH35 117 aa11.22□□□□□ -0.61
NPC1-207ENST00000588867 TSPAN15O95858 294 aa11.22□□□□□ -0.61
NPC1-207ENST00000588867 RD3LP0DJH9 198 aa11.22□□□□□ -0.61
NPC1-207ENST00000588867 SELENOTP62341 195 aa11.22□□□□□ -0.61
NPC1-207ENST00000588867 SERF2P84101 59 aa11.22□□□□□ -0.61
NPC1-207ENST00000588867 ZNF343Q6P1L6 599 aa11.22□□□□□ -0.61
NPC1-207ENST00000588867 UBE2E2Q96LR5 201 aa11.22□□□□□ -0.61
NPC1-207ENST00000588867 KCNIP2Q9NS61 270 aa11.22□□□□□ -0.61
NPC1-207ENST00000588867 SLC39A9Q9NUM3 307 aa11.22□□□□□ -0.61
NPC1-207ENST00000588867 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
NPC1-207ENST00000588867 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.21□□□□□ -0.61
NPC1-207ENST00000588867 TGOLN2O43493 480 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 TRBV12-3P01733 135 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 FABP1P07148 127 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 LINC00869P0C866 280 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 CD28P10747 220 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 PSG1P11464 419 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 ADMP35318 185 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 ARL3P36405 182 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 PROK1P58294 105 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 AKR1C8PQ5T2L2 129 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 Q6ZRG5 221 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 MYOZ3Q8TDC0 251 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 WIPF2Q8TF74 440 aaPredicted RBP11.21□□□□□ -0.61
NPC1-207ENST00000588867 VSIRQ9H7M9 311 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 UBQLN2Q9UHD9 624 aa11.21□□□□□ -0.61
NPC1-207ENST00000588867 PRR20EP86478 221 aa11.21□□□□□ -0.62
NPC1-207ENST00000588867 PRR20CP86479 221 aa11.21□□□□□ -0.62
NPC1-207ENST00000588867 PRR20DP86480 221 aa11.21□□□□□ -0.62
NPC1-207ENST00000588867 PRR20BP86481 221 aa11.21□□□□□ -0.62
NPC1-207ENST00000588867 PRR20AP86496 221 aa11.21□□□□□ -0.62
NPC1-207ENST00000588867 PEF1Q9UBV8 284 aaKnown RBP11.21□□□□□ -0.62
NPC1-207ENST00000588867 SETD2Q9BYW2 2564 aaPredicted RBP11.2□□□□□ -0.62
NPC1-207ENST00000588867 YPEL3P61236 119 aaPredicted RBP11.2□□□□□ -0.62
NPC1-207ENST00000588867 GCSAMLQ5JQS6 135 aa11.2□□□□□ -0.62
NPC1-207ENST00000588867 SPSB3Q6PJ21 355 aa11.2□□□□□ -0.62
NPC1-207ENST00000588867 Q8WTZ3 238 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms