RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CYP2G1PQ6ZSU1 146 aa17.38■□□□□ 0.37
ATG4D-209ENST00000588857 Q8N2B8 174 aa17.38■□□□□ 0.37
ATG4D-209ENST00000588857 FAM213BQ8TBF2 198 aa17.38■□□□□ 0.37
ATG4D-209ENST00000588857 TCRBV4S1A1TA0A5B7 111 aa17.37■□□□□ 0.37
ATG4D-209ENST00000588857 FAM223BA6NKX1 122 aa17.37■□□□□ 0.37
ATG4D-209ENST00000588857 CRYBA1P05813 215 aa17.37■□□□□ 0.37
ATG4D-209ENST00000588857 RNASE1P07998 156 aaKnown RBP17.37■□□□□ 0.37
ATG4D-209ENST00000588857 B2MP61769 119 aa17.37■□□□□ 0.37
ATG4D-209ENST00000588857 BLOC1S1P78537 153 aa17.37■□□□□ 0.37
ATG4D-209ENST00000588857 FAM223AQ8IWN6 122 aa17.37■□□□□ 0.37
ATG4D-209ENST00000588857 STPG3Q8N7X2 389 aa17.37■□□□□ 0.37
ATG4D-209ENST00000588857 TRGV9Q99603 122 aa17.37■□□□□ 0.37
ATG4D-209ENST00000588857 IGKV1D-37A0A075B6S9 117 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 GNG7O60262 68 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 PF4V1P10720 104 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 FHITP49789 147 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 TPPP2P59282 170 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 SELENOTP62341 195 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 CFHR3Q02985 330 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 ATP5G2Q06055 141 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 ACOT6Q3I5F7 207 aaPredicted RBP17.36■□□□□ 0.37
ATG4D-209ENST00000588857 Q56UQ5 140 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 Q6ZRG5 221 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 BPIFCQ8NFQ6 507 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 VSIRQ9H7M9 311 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 RPRMQ9NS64 109 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 SLC39A9Q9NUM3 307 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 TRAV30A0A087WSZ9 112 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 SCGB2A1O75556 95 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 IGLV1-40P01703 118 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 RPL15P61313 204 aaKnown RBP17.36■□□□□ 0.37
ATG4D-209ENST00000588857 SLC35B1P78383 322 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 PRR20EP86478 221 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 PRR20CP86479 221 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 PRR20DP86480 221 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 PRR20BP86481 221 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 PRR20AP86496 221 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 ZNF90Q03938 601 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 ZNF616Q08AN1 781 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 EEF1AKMT3Q96AZ1 226 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 TXN2Q99757 166 aa17.36■□□□□ 0.37
ATG4D-209ENST00000588857 IGHV3-23P01764 117 aa17.35■□□□□ 0.37
ATG4D-209ENST00000588857 FABP1P07148 127 aa17.35■□□□□ 0.37
ATG4D-209ENST00000588857 IGLC1P0CG04 106 aa17.35■□□□□ 0.37
ATG4D-209ENST00000588857 M6PRP20645 277 aa17.35■□□□□ 0.37
ATG4D-209ENST00000588857 RAB2AP61019 212 aa17.35■□□□□ 0.37
ATG4D-209ENST00000588857 OR10G4Q8NGN3 311 aa17.35■□□□□ 0.37
ATG4D-209ENST00000588857 OR10G9Q8NGN4 311 aa17.35■□□□□ 0.37
ATG4D-209ENST00000588857 OR10G7Q8NGN6 311 aa17.35■□□□□ 0.37
ATG4D-209ENST00000588857 ATRQ13535 2644 aa17.35■□□□□ 0.37
ATG4D-209ENST00000588857 LINC00869P0C866 280 aa17.34■□□□□ 0.37
ATG4D-209ENST00000588857 GATA2P23769 480 aaPredicted RBP17.34■□□□□ 0.37
ATG4D-209ENST00000588857 ZNF329Q86UD4 541 aa17.34■□□□□ 0.37
ATG4D-209ENST00000588857 GAR1Q9NY12 217 aaKnown RBP17.34■□□□□ 0.37
ATG4D-209ENST00000588857 TRBV7-1A0A0A6YYK4 115 aa17.33■□□□□ 0.37
ATG4D-209ENST00000588857 PSMB11A5LHX3 300 aa17.33■□□□□ 0.37
ATG4D-209ENST00000588857 YIF1AO95070 293 aa17.33■□□□□ 0.37
ATG4D-209ENST00000588857 IGHG4P01861 327 aa17.33■□□□□ 0.37
ATG4D-209ENST00000588857 FCGR2BP31994 310 aaPredicted RBP17.33■□□□□ 0.37
ATG4D-209ENST00000588857 NDUFA5Q16718 116 aa17.33■□□□□ 0.37
ATG4D-209ENST00000588857 TIGITQ495A1 244 aa17.33■□□□□ 0.37
ATG4D-209ENST00000588857 PXDC1Q5TGL8 231 aa17.33■□□□□ 0.37
ATG4D-209ENST00000588857 ZNF502Q8TBZ5 544 aa17.33■□□□□ 0.37
ATG4D-209ENST00000588857 USMG5Q96IX5 58 aa17.33■□□□□ 0.37
ATG4D-209ENST00000588857 TMEM89A2RUT3 159 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 Q6ZSV7 163 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 MDFIQ99750 246 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 A0A0G2JLM5 398 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 OR2T8A6NH00 312 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 H2AFB1P0C5Y9 115 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 RAB9AP51151 201 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 GCSAMLQ5JQS6 135 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 TEX38Q6PEX7 206 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 RPP25LQ8N5L8 163 aaKnown RBP17.32■□□□□ 0.36
ATG4D-209ENST00000588857 ACTR3CQ9C0K3 210 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-209ENST00000588857 KLK15Q9H2R5 256 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 SERTAD4Q9NUC0 356 aa17.32■□□□□ 0.36
ATG4D-209ENST00000588857 F8W735 103 aaPredicted RBP17.31■□□□□ 0.36
ATG4D-209ENST00000588857 IGKV1-17P01599 117 aa17.31■□□□□ 0.36
ATG4D-209ENST00000588857 FAM122CQ6P4D5 195 aa17.31■□□□□ 0.36
ATG4D-209ENST00000588857 RCC1LQ96I51 464 aaKnown RBP17.31■□□□□ 0.36
ATG4D-209ENST00000588857 HRH4Q9H3N8 390 aa17.31■□□□□ 0.36
ATG4D-209ENST00000588857 A0A1W2PPV4 95 aa17.3■□□□□ 0.36
ATG4D-209ENST00000588857 NUPL2O15504 423 aaKnown RBP17.3■□□□□ 0.36
ATG4D-209ENST00000588857 RD3LP0DJH9 198 aa17.3■□□□□ 0.36
ATG4D-209ENST00000588857 PSMB8P28062 276 aa17.3■□□□□ 0.36
ATG4D-209ENST00000588857 SFT2D1Q8WV19 159 aa17.3■□□□□ 0.36
ATG4D-209ENST00000588857 PFDN2Q9UHV9 154 aa17.3■□□□□ 0.36
ATG4D-209ENST00000588857 FBN1P35555 2871 aaKnown RBP17.29■□□□□ 0.36
ATG4D-209ENST00000588857 LINC00862A6NCI5 91 aa17.29■□□□□ 0.36
ATG4D-209ENST00000588857 TCF21O43680 179 aa17.29■□□□□ 0.36
ATG4D-209ENST00000588857 CLEC3BP05452 202 aa17.29■□□□□ 0.36
ATG4D-209ENST00000588857 GPR183P32249 361 aa17.29■□□□□ 0.36
ATG4D-209ENST00000588857 YPEL3P61236 119 aaPredicted RBP17.29■□□□□ 0.36
ATG4D-209ENST00000588857 CLEC19AQ6UXS0 136 aa17.29■□□□□ 0.36
ATG4D-209ENST00000588857 ATP6V0BQ99437 205 aa17.29■□□□□ 0.36
ATG4D-209ENST00000588857 C19orf24Q9BVV8 132 aa17.29■□□□□ 0.36
ATG4D-209ENST00000588857 TEX46H3BTG2 121 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 CTSGP08311 255 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 PSG1P11464 419 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms