RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CUBNO60494 3623 aa20.33■□□□□ 0.84
SCAMP4-210ENST00000588555 F8W735 103 aaPredicted RBP20.32■□□□□ 0.84
SCAMP4-210ENST00000588555 CLN5O75503 358 aa20.32■□□□□ 0.84
SCAMP4-210ENST00000588555 RHOGP84095 191 aa20.32■□□□□ 0.84
SCAMP4-210ENST00000588555 CFHR3Q02985 330 aa20.32■□□□□ 0.84
SCAMP4-210ENST00000588555 TMEM95Q3KNT9 176 aa20.32■□□□□ 0.84
SCAMP4-210ENST00000588555 NPFFR1Q9GZQ6 430 aa20.32■□□□□ 0.84
SCAMP4-210ENST00000588555 ZNF702PQ9H963 129 aa20.32■□□□□ 0.84
SCAMP4-210ENST00000588555 ZNF355PQ9NSJ1 428 aa20.32■□□□□ 0.84
SCAMP4-210ENST00000588555 PFDN2Q9UHV9 154 aa20.32■□□□□ 0.84
SCAMP4-210ENST00000588555 S4R3C0 116 aa20.32■□□□□ 0.84
SCAMP4-210ENST00000588555 DNAJC9-AS1A6NH13 148 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 H2AFB1P0C5Y9 115 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 SPSB3Q6PJ21 355 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 NECAP1Q8NC96 275 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 PRSS22Q9GZN4 317 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 BRI3O95415 125 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 SELENOTP62341 195 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 VN1R17PQ8TDU5 208 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 MBD3L1Q8WWY6 194 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 ESM1Q9NQ30 184 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 C21orf62Q9NYP8 219 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 CDC42EP3Q9UKI2 254 aa20.31■□□□□ 0.84
SCAMP4-210ENST00000588555 IGKV1-17P01599 117 aa20.3■□□□□ 0.84
SCAMP4-210ENST00000588555 SCGB2A2Q13296 93 aa20.3■□□□□ 0.84
SCAMP4-210ENST00000588555 C15orf32Q32M92 178 aa20.3■□□□□ 0.84
SCAMP4-210ENST00000588555 MS4A10Q96PG2 267 aa20.3■□□□□ 0.84
SCAMP4-210ENST00000588555 NF1P21359 2839 aa20.3■□□□□ 0.84
SCAMP4-210ENST00000588555 SEC14L6B5MCN3 397 aa20.29■□□□□ 0.84
SCAMP4-210ENST00000588555 SRD5A1P18405 259 aa20.29■□□□□ 0.84
SCAMP4-210ENST00000588555 NPBWR1P48145 328 aa20.29■□□□□ 0.84
SCAMP4-210ENST00000588555 MFAP4P55083 255 aa20.29■□□□□ 0.84
SCAMP4-210ENST00000588555 H3BUA1 57 aa20.29■□□□□ 0.84
SCAMP4-210ENST00000588555 FCGR2BP31994 310 aaPredicted RBP20.29■□□□□ 0.84
SCAMP4-210ENST00000588555 FAM122CQ6P4D5 195 aa20.29■□□□□ 0.84
SCAMP4-210ENST00000588555 SFT2D1Q8WV19 159 aa20.29■□□□□ 0.84
SCAMP4-210ENST00000588555 SLC25A22Q9H936 323 aa20.29■□□□□ 0.84
SCAMP4-210ENST00000588555 TRAV1-1A0A0B4J248 108 aa20.28■□□□□ 0.84
SCAMP4-210ENST00000588555 PSMB11A5LHX3 300 aa20.28■□□□□ 0.84
SCAMP4-210ENST00000588555 EIF3GO75821 320 aaKnown RBP eCLIP20.28■□□□□ 0.84
SCAMP4-210ENST00000588555 IGLV1-40P01703 118 aa20.28■□□□□ 0.84
SCAMP4-210ENST00000588555 Q8N2B8 174 aa20.28■□□□□ 0.84
SCAMP4-210ENST00000588555 MARC2Q969Z3 335 aa20.28■□□□□ 0.84
SCAMP4-210ENST00000588555 ACTR3CQ9C0K3 210 aaPredicted RBP20.28■□□□□ 0.84
SCAMP4-210ENST00000588555 CTXND1A0A1B0GTU2 59 aa20.27■□□□□ 0.84
SCAMP4-210ENST00000588555 IL34Q6ZMJ4 242 aa20.27■□□□□ 0.84
SCAMP4-210ENST00000588555 ZNF502Q8TBZ5 544 aa20.27■□□□□ 0.84
SCAMP4-210ENST00000588555 RAB24Q969Q5 203 aa20.27■□□□□ 0.84
SCAMP4-210ENST00000588555 A0A1B0GV50 99 aa20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 IGHV3-23P01764 117 aa20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 CCL20P78556 96 aa20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 TIGITQ495A1 244 aa20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 LCN15Q6UWW0 184 aa20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 TXN2Q99757 166 aa20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 NUDT19A8MXV4 375 aa20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 CLDN34H7C241 214 aa20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 CDC34P49427 236 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 EIF4E3Q8N5X7 224 aaKnown RBP20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 CITED4Q96RK1 184 aa20.26■□□□□ 0.83
SCAMP4-210ENST00000588555 MAP1LC3B2A6NCE7 125 aa20.25■□□□□ 0.83
SCAMP4-210ENST00000588555 FAM223BA6NKX1 122 aa20.25■□□□□ 0.83
SCAMP4-210ENST00000588555 GNG7O60262 68 aa20.25■□□□□ 0.83
SCAMP4-210ENST00000588555 Q56UQ5 140 aa20.25■□□□□ 0.83
SCAMP4-210ENST00000588555 FAM223AQ8IWN6 122 aa20.25■□□□□ 0.83
SCAMP4-210ENST00000588555 TMEM37Q8WXS4 190 aa20.25■□□□□ 0.83
SCAMP4-210ENST00000588555 MAP1LC3BQ9GZQ8 125 aa20.25■□□□□ 0.83
SCAMP4-210ENST00000588555 SEPSECSQ9HD40 501 aaKnown RBP20.25■□□□□ 0.83
SCAMP4-210ENST00000588555 TRAV30A0A087WSZ9 112 aa20.24■□□□□ 0.83
SCAMP4-210ENST00000588555 HBE1P02100 147 aa20.24■□□□□ 0.83
SCAMP4-210ENST00000588555 TRGV3P03979 118 aa20.24■□□□□ 0.83
SCAMP4-210ENST00000588555 Q71RC1 249 aaPredicted RBP20.24■□□□□ 0.83
SCAMP4-210ENST00000588555 CCDC140Q96MF4 163 aa20.24■□□□□ 0.83
SCAMP4-210ENST00000588555 RAB19A4D1S5 217 aa20.23■□□□□ 0.83
SCAMP4-210ENST00000588555 HMGB3O15347 200 aaKnown RBP20.23■□□□□ 0.83
SCAMP4-210ENST00000588555 PSG1P11464 419 aa20.23■□□□□ 0.83
SCAMP4-210ENST00000588555 KLK15Q9H2R5 256 aa20.23■□□□□ 0.83
SCAMP4-210ENST00000588555 FAM181BA6NEQ2 426 aa20.23■□□□□ 0.83
SCAMP4-210ENST00000588555 IGHG4P01861 327 aa20.23■□□□□ 0.83
SCAMP4-210ENST00000588555 CTSGP08311 255 aa20.23■□□□□ 0.83
SCAMP4-210ENST00000588555 FGF8P55075 233 aaPredicted RBP20.23■□□□□ 0.83
SCAMP4-210ENST00000588555 COMMD1Q8N668 190 aa20.23■□□□□ 0.83
SCAMP4-210ENST00000588555 C19orf24Q9BVV8 132 aa20.23■□□□□ 0.83
SCAMP4-210ENST00000588555 A0A1W2PPV4 95 aa20.22■□□□□ 0.83
SCAMP4-210ENST00000588555 OR2T8A6NH00 312 aa20.22■□□□□ 0.83
SCAMP4-210ENST00000588555 OR5G3P0C626 314 aa20.22■□□□□ 0.83
SCAMP4-210ENST00000588555 TPPP2P59282 170 aa20.22■□□□□ 0.83
SCAMP4-210ENST00000588555 YPEL3P61236 119 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-210ENST00000588555 RHOBP62745 196 aa20.22■□□□□ 0.83
SCAMP4-210ENST00000588555 ATP5G2Q06055 141 aa20.22■□□□□ 0.83
SCAMP4-210ENST00000588555 SPATA31B1PQ5VZV4 182 aa20.22■□□□□ 0.83
SCAMP4-210ENST00000588555 PATE2Q6UY27 113 aa20.22■□□□□ 0.83
SCAMP4-210ENST00000588555 SCRT1Q9BWW7 348 aa20.22■□□□□ 0.83
SCAMP4-210ENST00000588555 PLP1P60201 277 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 ZNF329Q86UD4 541 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 GATAD1Q8WUU5 269 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 EEF1AKMT3Q96AZ1 226 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 TRBV7-1A0A0A6YYK4 115 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 INAFM1C9JVW0 142 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 TOMM40O96008 361 aa20.21■□□□□ 0.83
SCAMP4-210ENST00000588555 RD3LP0DJH9 198 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms