RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 RIPPLY3P57055 190 aa11.3□□□□□ -0.6
CACNA1A-209ENST00000587525 MRPS18CQ9Y3D5 142 aaKnown RBP11.3□□□□□ -0.6
CACNA1A-209ENST00000587525 ADGRG4Q8IZF6 3080 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 IGHV3OR16-10A0A075B7F0 116 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 IGHV3-66A0A0C4DH42 116 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 CRYABP02511 175 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 GLRXP35754 106 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 ZNF138P52744 262 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 NHLH1Q02575 133 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 LINC00305Q7Z4B0 112 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 TMEM116Q8NCL8 245 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 DCHS1Q96JQ0 3298 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 C8orf88P0DMB2 117 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 LCN2P80188 198 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 C1orf185Q5T7R7 199 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 TP73-AS1Q9UF72 201 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 HCFC1P51610 2035 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 DAZAP2Q15038 168 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 MBNL3Q9NUK0 354 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 IL36BQ9NZH7 164 aa11.29□□□□□ -0.6
CACNA1A-209ENST00000587525 TRAV1-1A0A0B4J248 108 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 SS18L1O75177 396 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 IGLV2-14P01704 120 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 IGHV1-46P01743 117 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 RELQ04864 619 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 ZNF295-AS1Q8N0V1 137 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 KIAA1549Q9HCM3 1950 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 CEP192Q8TEP8 1941 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 FXYD7P58549 80 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 LYPD2Q6UXB3 125 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 GOLT1AQ6ZVE7 132 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 SRRM5B3KS81 715 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 P01737 135 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 C3orf79P0CE67 100 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 CT45A10P0DMU9 189 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 PPOXP50336 477 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 TMEM177Q53S58 311 aa11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 PRR30Q53SZ7 412 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-209ENST00000587525 VENTXO95231 258 aa11.27□□□□□ -0.6
CACNA1A-209ENST00000587525 WDR73Q6P4I2 378 aa11.27□□□□□ -0.6
CACNA1A-209ENST00000587525 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.6
CACNA1A-209ENST00000587525 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.6
CACNA1A-209ENST00000587525 KCNS1Q96KK3 526 aa11.27□□□□□ -0.6
CACNA1A-209ENST00000587525 NACAE9PAV3 2078 aa11.27□□□□□ -0.6
CACNA1A-209ENST00000587525 MSMPQ1L6U9 139 aa11.27□□□□□ -0.61
CACNA1A-209ENST00000587525 S100A7AQ86SG5 101 aa11.27□□□□□ -0.61
CACNA1A-209ENST00000587525 RPL27AP46776 148 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-209ENST00000587525 RBPJQ06330 500 aa11.27□□□□□ -0.61
CACNA1A-209ENST00000587525 C11orf53Q8IXP5 236 aa11.27□□□□□ -0.61
CACNA1A-209ENST00000587525 DEFB104AQ8WTQ1 72 aa11.27□□□□□ -0.61
CACNA1A-209ENST00000587525 F11RQ9Y624 299 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-209ENST00000587525 MPDU1O75352 247 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 ARL3P36405 182 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 ERVK11-1P61568 191 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 RCHY1Q96PM5 261 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 TMUB1Q9BVT8 246 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 IFI27L2Q9H2X8 130 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 hDV102S1A0JD36 115 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 SLC25A33Q9BSK2 321 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 A0A1W2PN81 502 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 C15orf61A6NNL5 157 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 ZNF207O43670 478 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 WNT2P09544 360 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 Q5PR19 223 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 PNKDQ8N490 385 aa11.26□□□□□ -0.61
CACNA1A-209ENST00000587525 SRRM4A7MD48 611 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 FCGR2BP31994 310 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 MAS1LP35410 378 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 CA7P43166 264 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 KIR2DS2P43631 304 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 MPV17L2Q567V2 206 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 RNASE8Q8TDE3 154 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 RASL11BQ9BPW5 248 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 LRP4O75096 1905 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 DMDP11532 3685 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 TEX50A0A1B0GTY4 177 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 A0A1B0GWJ7 208 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 OR2J3O76001 311 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 TIMM23BQ5SRD1 257 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 STAG3L2P0CL84 134 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 STAG3L3P0CL85 134 aa11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 CEACAM8P31997 349 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-209ENST00000587525 DSCAML1Q8TD84 2053 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 GNG7O60262 68 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 HYPMO75409 117 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 ECSCRQ19T08 205 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 IGFL4Q6B9Z1 124 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 FA2HQ7L5A8 372 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 LOXL4Q96JB6 756 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 TPSG1Q9NRR2 321 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 NCKAP5O14513 1909 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 OR4C46A6NHA9 309 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 CLEC3BP05452 202 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 CD3EP07766 207 aa11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 SSBP2P81877 361 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-209ENST00000587525 RNASEH2CQ8TDP1 164 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms