RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 TCF24Q7RTU0 167 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 SMIM15Q7Z3B0 74 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 MLST8Q9BVC4 326 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 CST9LQ9H4G1 147 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 RPUSD1Q9UJJ7 312 aaKnown RBP13.32□□□□□ -0.28
RANBP3-209ENST00000587411 hDV102S1A0JD36 115 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 FSTL3O95633 263 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 IGHG3P01860 377 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 SLC25A5P05141 298 aaKnown RBP13.31□□□□□ -0.28
RANBP3-209ENST00000587411 GNG5P63218 68 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 THAP8Q8NA92 274 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 MAP1LC3CQ9BXW4 147 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 SCRT2Q9NQ03 307 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 TM4SF5O14894 197 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 OCIAD2Q56VL3 154 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 NDFIP1Q9BT67 221 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 FAM186AA6NE01 2351 aa13.31□□□□□ -0.28
RANBP3-209ENST00000587411 A0A1W2PNU3 283 aaPredicted RBP13.3□□□□□ -0.28
RANBP3-209ENST00000587411 CD5LO43866 347 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 P01737 135 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 APOA2P02652 100 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 SUB1P53999 127 aaKnown RBP eCLIP13.3□□□□□ -0.28
RANBP3-209ENST00000587411 FOXA3P55318 350 aaPredicted RBP13.3□□□□□ -0.28
RANBP3-209ENST00000587411 RBMXL3Q8N7X1 1067 aaKnown RBP13.3□□□□□ -0.28
RANBP3-209ENST00000587411 FAM231BA6NCW3 169 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 LAMTOR5O43504 91 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 SSBP2P81877 361 aaPredicted RBP13.3□□□□□ -0.28
RANBP3-209ENST00000587411 HIST1H1AQ02539 215 aaPredicted RBP13.3□□□□□ -0.28
RANBP3-209ENST00000587411 LDLRAD2Q5SZI1 272 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
RANBP3-209ENST00000587411 NPIPB3Q92617 1050 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 PERPQ96FX8 193 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 FMC1Q96HJ9 113 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 HARBI1Q96MB7 349 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 HSPB8Q9UJY1 196 aa13.3□□□□□ -0.28
RANBP3-209ENST00000587411 MUC21A0A0G2JKD1 596 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 MUC21A0A140T8X8 626 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 MSMPQ1L6U9 139 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 SPRNQ5BIV9 151 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 MUC21Q5SSG8 566 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 ALKBH2Q6NS38 261 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 ZNF833PQ6ZTB9 187 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 LINC00173Q6ZV60 143 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 LINC00305Q7Z4B0 112 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 C19orf71A6NCJ1 209 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 OR2T8A6NH00 312 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 M0QZ24 198 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 ZNF883P0CG24 379 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 SP9P0CG40 484 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 C9orf106Q8NAJ2 232 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 OR4A5Q8NH83 315 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 ITLN1Q8WWA0 313 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 VPS25Q9BRG1 176 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 PLSCR4Q9NRQ2 329 aa13.29□□□□□ -0.28
RANBP3-209ENST00000587411 IGKV1D-37A0A075B6S9 117 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 LOC102724200A0A096LPH7 203 aaPredicted RBP13.28□□□□□ -0.28
RANBP3-209ENST00000587411 PGPA6NDG6 321 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 MOSP00540 346 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 PSG1P11464 419 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 GATA4P43694 442 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 ETFRF1Q6IPR1 90 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 GTSF1Q8WW33 167 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 PMCHL2Q9BQD1 86 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 FNDC4Q9H6D8 234 aaPredicted RBP13.28□□□□□ -0.28
RANBP3-209ENST00000587411 RNF7Q9UBF6 113 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 DKK4Q9UBT3 224 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 TP73-AS1Q9UF72 201 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 LTAP01374 205 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 BHLHA15Q7RTS1 189 aaPredicted RBP13.28□□□□□ -0.28
RANBP3-209ENST00000587411 C5orf17Q8NAS9 161 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 H1FXQ92522 213 aaKnown RBP13.28□□□□□ -0.28
RANBP3-209ENST00000587411 DAZAP1Q96EP5 407 aaKnown RBP13.28□□□□□ -0.28
RANBP3-209ENST00000587411 PGLYRP4Q96LB8 373 aa13.28□□□□□ -0.28
RANBP3-209ENST00000587411 PRR33A8MZF0 331 aa13.27□□□□□ -0.28
RANBP3-209ENST00000587411 CHEK1O14757 476 aa13.27□□□□□ -0.28
RANBP3-209ENST00000587411 TMEM177Q53S58 311 aa13.27□□□□□ -0.28
RANBP3-209ENST00000587411 AMMECR1LQ6DCA0 310 aa13.27□□□□□ -0.28
RANBP3-209ENST00000587411 VSTM2AQ8TAG5 236 aa13.27□□□□□ -0.28
RANBP3-209ENST00000587411 GAFA1Q96PS6 74 aa13.27□□□□□ -0.28
RANBP3-209ENST00000587411 SPRY3O43610 288 aa13.27□□□□□ -0.29
RANBP3-209ENST00000587411 FAM201AQ5SY85 155 aa13.27□□□□□ -0.29
RANBP3-209ENST00000587411 ERASQ7Z444 233 aa13.27□□□□□ -0.29
RANBP3-209ENST00000587411 TMEM167AQ8TBQ9 72 aa13.27□□□□□ -0.29
RANBP3-209ENST00000587411 RND1Q92730 232 aa13.27□□□□□ -0.29
RANBP3-209ENST00000587411 ZNF71Q9NQZ8 489 aaPredicted RBP13.27□□□□□ -0.29
RANBP3-209ENST00000587411 SLC25A15Q9Y619 301 aa13.27□□□□□ -0.29
RANBP3-209ENST00000587411 CBY3A6NI87 242 aa13.26□□□□□ -0.29
RANBP3-209ENST00000587411 DUX4L9Q6RFH8 374 aaPredicted RBP13.26□□□□□ -0.29
RANBP3-209ENST00000587411 LINC00322Q6ZN03 302 aaPredicted RBP13.26□□□□□ -0.29
RANBP3-209ENST00000587411 ZCCHC24Q8N2G6 241 aaKnown RBP13.26□□□□□ -0.29
RANBP3-209ENST00000587411 MRPL20Q9BYC9 149 aaKnown RBP13.26□□□□□ -0.29
RANBP3-209ENST00000587411 PEF1Q9UBV8 284 aaKnown RBP13.26□□□□□ -0.29
RANBP3-209ENST00000587411 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
RANBP3-209ENST00000587411 ZNF835Q9Y2P0 537 aa13.26□□□□□ -0.29
RANBP3-209ENST00000587411 FREM2Q5SZK8 3169 aa13.26□□□□□ -0.29
RANBP3-209ENST00000587411 FAM71F2Q6NXP2 309 aa13.26□□□□□ -0.29
RANBP3-209ENST00000587411 BLNKQ8WV28 456 aa13.26□□□□□ -0.29
RANBP3-209ENST00000587411 RNF24Q9Y225 148 aa13.26□□□□□ -0.29
RANBP3-209ENST00000587411 NBEAP1P0C6P0 100 aa13.26□□□□□ -0.29
RANBP3-209ENST00000587411 WT1-ASQ06250 92 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms