RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 LRP1BQ9NZR2 4599 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 BUB3O43684 328 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 IFNA10P01566 189 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 SPART-AS1P0CW21 52 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 NPY1RP25929 384 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 RCVRNP35243 200 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 RND2P52198 227 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 AKR1C2P52895 323 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 SUB1P53999 127 aaKnown RBP eCLIP8.43□□□□□ -1.06
BRCA1-225ENST00000586385 EMP1P54849 157 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 FXYD7P58549 80 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 YPEL3P61236 119 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-225ENST00000586385 LSM3P62310 102 aaKnown RBP8.43□□□□□ -1.06
BRCA1-225ENST00000586385 ZNF709Q8N972 641 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 OR1S2Q8NGQ3 325 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 YIPF6Q96EC8 236 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 C1QTNF4Q9BXJ3 329 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 SCPEP1Q9HB40 452 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 SEPSECSQ9HD40 501 aaKnown RBP8.43□□□□□ -1.06
BRCA1-225ENST00000586385 NRN1Q9NPD7 142 aa8.43□□□□□ -1.06
BRCA1-225ENST00000586385 TRAV30A0A087WSZ9 112 aa8.42□□□□□ -1.06
BRCA1-225ENST00000586385 C3orf85A0A1B0GTC6 90 aa8.42□□□□□ -1.06
BRCA1-225ENST00000586385 PGAM2P15259 253 aa8.42□□□□□ -1.06
BRCA1-225ENST00000586385 UCP1P25874 307 aa8.42□□□□□ -1.06
BRCA1-225ENST00000586385 OR10J1P30954 320 aa8.42□□□□□ -1.06
BRCA1-225ENST00000586385 FAM222AQ5U5X8 452 aa8.42□□□□□ -1.06
BRCA1-225ENST00000586385 OR4D10Q8NGI6 311 aa8.42□□□□□ -1.06
BRCA1-225ENST00000586385 LHFPL5Q8TAF8 219 aa8.42□□□□□ -1.06
BRCA1-225ENST00000586385 ZNF486Q96H40 463 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-225ENST00000586385 NARS2Q96I59 477 aaKnown RBP8.42□□□□□ -1.06
BRCA1-225ENST00000586385 WDR12Q9GZL7 423 aaKnown RBP8.42□□□□□ -1.06
BRCA1-225ENST00000586385 SOCS3O14543 225 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 APOA1P02647 267 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 IL4P05112 153 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 ELK1P19419 428 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 NKX2-1P43699 371 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-225ENST00000586385 AP2S1P53680 142 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-225ENST00000586385 SPCS3P61009 180 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 NUTF2P61970 127 aaKnown RBP8.41□□□□□ -1.06
BRCA1-225ENST00000586385 SNRPD3P62318 126 aaKnown RBP8.41□□□□□ -1.06
BRCA1-225ENST00000586385 TNP2Q05952 138 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 RNF212Q495C1 297 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 SIGLEC15Q6ZMC9 328 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 UBE2DNLQ8IWF7 75 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 Q8WTZ3 238 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 FAM210BQ96KR6 192 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 COMMD3Q9UBI1 195 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 KLK11Q9UBX7 282 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 NACAE9PAV3 2078 aa8.41□□□□□ -1.06
BRCA1-225ENST00000586385 IGHV3OR16-12A0A075B7B8 117 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 SMIM9A6NGZ8 99 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 IFNA21P01568 189 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 CD3DP04234 171 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 HTR2BP41595 481 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 EIF2B2P49770 351 aaKnown RBP8.4□□□□□ -1.06
BRCA1-225ENST00000586385 TRIM16LQ309B1 348 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 C2orf83Q53S99 150 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 RNASE12Q5GAN4 147 aaKnown RBP8.4□□□□□ -1.06
BRCA1-225ENST00000586385 C1orf134Q5TEV5 83 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 TMEM88Q6PEY1 159 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 OR13C8Q8NGS7 320 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 OR52E5Q8NH55 327 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 NPIPB3Q92617 1050 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 NIPSNAP3BQ9BS92 247 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 PDCD10Q9BUL8 212 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 SLC35B3Q9H1N7 401 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 ENY2Q9NPA8 101 aa8.4□□□□□ -1.06
BRCA1-225ENST00000586385 RPS10-NUDT3A0A1W2PQS6 291 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 TMEM189A5PLL7 270 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 HPGDSO60760 199 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 ATP6V1G2O95670 118 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 TOMM40O96008 361 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 PSG1P11464 419 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 SLC25A4P12235 298 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 NCS1P62166 190 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 OXA1LQ15070 435 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 OR51G1Q8NGK1 321 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 OR52I2Q8NH67 350 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 RNASEH2CQ8TDP1 164 aaKnown RBP8.39□□□□□ -1.07
BRCA1-225ENST00000586385 GLYATL2Q8WU03 294 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 GPR146Q96CH1 333 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 CLUHP3Q96NS8 147 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 SAV1Q9H4B6 383 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-225ENST00000586385 CACNG5Q9UF02 275 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 RFNGQ9Y644 331 aa8.39□□□□□ -1.07
BRCA1-225ENST00000586385 F6UB75 175 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 SCGB2A1O75556 95 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 CDK2AP2O75956 126 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 ATG12O94817 140 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 CDS2O95674 445 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 OR5AC1P0C628 307 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 RD3LP0DJH9 198 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 HTN3P15516 51 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 MEF2DQ14814 521 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 ZNF79Q15937 498 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 RNASE10Q5GAN6 216 aaKnown RBP8.38□□□□□ -1.07
BRCA1-225ENST00000586385 FOXI2Q6ZQN5 318 aa8.38□□□□□ -1.07
BRCA1-225ENST00000586385 ARRDC1Q8N5I2 433 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms