RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 GGCTO75223 188 aaKnown RBP10.04□□□□□ -0.8
TRIM47-202ENST00000585333 TPT1P13693 172 aaKnown RBP10.04□□□□□ -0.8
TRIM47-202ENST00000585333 ARL3P36405 182 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 YPEL3P61236 119 aaPredicted RBP10.04□□□□□ -0.8
TRIM47-202ENST00000585333 KRTAP24-1Q3LI83 254 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 BTNL8Q6UX41 500 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 TREML4Q6UXN2 200 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 C12orf54Q6X4T0 127 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 C19orf35Q6ZS72 473 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 SLC51BQ86UW2 128 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 HAPLN4Q86UW8 402 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 BPIFCQ8NFQ6 507 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 Q8WTZ3 238 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 DPF1Q92782 380 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 ZNF471Q9BX82 626 aaPredicted RBP10.04□□□□□ -0.8
TRIM47-202ENST00000585333 WDR61Q9GZS3 305 aaKnown RBP10.04□□□□□ -0.8
TRIM47-202ENST00000585333 TIMM9Q9Y5J7 89 aa10.04□□□□□ -0.8
TRIM47-202ENST00000585333 HSPB1P04792 205 aaKnown RBP10.03□□□□□ -0.8
TRIM47-202ENST00000585333 CLEC3BP05452 202 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 CXCL2P19875 107 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 FGF7P21781 194 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 GPR183P32249 361 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 BMI1P35226 326 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 CAMLGP49069 296 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 CD300CQ08708 224 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 ARL16Q0P5N6 197 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 LGALSLQ3ZCW2 172 aaPredicted RBP10.03□□□□□ -0.8
TRIM47-202ENST00000585333 FAM106AQ4KMX7 169 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 CLEC19AQ6UXS0 136 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 ZNF600Q6ZNG1 722 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 C9orf62Q8N4C0 152 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 KLHL30-AS1Q8NEE0 82 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 TAF15Q92804 592 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRIM47-202ENST00000585333 GINS3Q9BRX5 216 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 SMIM3Q9BZL3 60 aa10.03□□□□□ -0.8
TRIM47-202ENST00000585333 LSM4Q9Y4Z0 139 aaKnown RBP10.03□□□□□ -0.8
TRIM47-202ENST00000585333 OR2T8A6NH00 312 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 TOMM40O96008 361 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 MBP02144 154 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 IGLC1P0CG04 106 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 RD3LP0DJH9 198 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 RPL29P47914 159 aaKnown RBP10.02□□□□□ -0.81
TRIM47-202ENST00000585333 SERF2P84101 59 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 OPCMLQ14982 345 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 RPEL1Q2QD12 228 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 SHISA2Q6UWI4 295 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 Q6ZRG5 221 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 C3orf56Q8N813 242 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 OR4F17Q8NGA8 305 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 STOML3Q8TAV4 291 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 CCDC140Q96MF4 163 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 OR4F4Q96R69 305 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 PSMG3Q9BT73 122 aaPredicted RBP10.02□□□□□ -0.81
TRIM47-202ENST00000585333 GNB4Q9HAV0 340 aa10.02□□□□□ -0.81
TRIM47-202ENST00000585333 IGHV3-21A0A0B4J1V1 117 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 I3L521 148 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 BMPR1BO00238 502 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 NDUFA4O00483 81 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 AGPAT2O15120 278 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 IGHV3-11P01762 117 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 CD28P10747 220 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 SRSF2Q01130 221 aaKnown RBP10.01□□□□□ -0.81
TRIM47-202ENST00000585333 ZNF616Q08AN1 781 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 KIAA0141Q14154 515 aaPredicted RBP10.01□□□□□ -0.81
TRIM47-202ENST00000585333 C10orf99Q6UWK7 81 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 BAP18Q8IXM2 172 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 OR51G1Q8NGK1 321 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 PHYHIPLQ96FC7 376 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 NARS2Q96I59 477 aaKnown RBP10.01□□□□□ -0.81
TRIM47-202ENST00000585333 PFDN5Q99471 154 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 CITED2Q99967 270 aaPredicted RBP10.01□□□□□ -0.81
TRIM47-202ENST00000585333 ZNF747Q9BV97 191 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 NPCDR1Q9BY65 106 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 SLC45A2Q9UMX9 530 aa10.01□□□□□ -0.81
TRIM47-202ENST00000585333 ELOA3CA0A087WX78 387 aaPredicted RBP10□□□□□ -0.81
TRIM47-202ENST00000585333 LINC01619G3V211 115 aa10□□□□□ -0.81
TRIM47-202ENST00000585333 TSPAN15O95858 294 aa10□□□□□ -0.81
TRIM47-202ENST00000585333 CTSGP08311 255 aa10□□□□□ -0.81
TRIM47-202ENST00000585333 MLANAQ16655 118 aa10□□□□□ -0.81
TRIM47-202ENST00000585333 TCTEX1D4Q5JR98 221 aa10□□□□□ -0.81
TRIM47-202ENST00000585333 RPL7L1Q6DKI1 246 aaKnown RBP10□□□□□ -0.81
TRIM47-202ENST00000585333 GPHB5Q86YW7 130 aa10□□□□□ -0.81
TRIM47-202ENST00000585333 OR1L4Q8NGR5 311 aa10□□□□□ -0.81
TRIM47-202ENST00000585333 RNF2Q99496 336 aa10□□□□□ -0.81
TRIM47-202ENST00000585333 CITED1Q99966 193 aa10□□□□□ -0.81
TRIM47-202ENST00000585333 COL6A5A8TX70 2615 aa10□□□□□ -0.81
TRIM47-202ENST00000585333 ANKRD34BA5PLL1 514 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 UMAD1C9J7I0 102 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 BOLA2-SMG1P6H3BVE0 249 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 OR2C1O95371 312 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 IGKV1-17P01599 117 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 IGHV3-48P01763 117 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 SEC11BP0C7V7 166 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 MYCNOSP40205 109 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 ELLP55199 621 aaPredicted RBP9.99□□□□□ -0.81
TRIM47-202ENST00000585333 LCNL1Q6ZST4 164 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 HSD17B11Q8NBQ5 300 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 OR1N2Q8NGR9 330 aa9.99□□□□□ -0.81
TRIM47-202ENST00000585333 OR2G3Q8NGZ4 309 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms