RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 CD7P09564 240 aa12.18□□□□□ -0.46
ERBB2-222ENST00000584908 YPEL3P61236 119 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-222ENST00000584908 LAMTOR1Q6IAA8 161 aa12.18□□□□□ -0.46
ERBB2-222ENST00000584908 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
ERBB2-222ENST00000584908 SLC16A13Q7RTY0 426 aa12.18□□□□□ -0.46
ERBB2-222ENST00000584908 OR1S2Q8NGQ3 325 aa12.18□□□□□ -0.46
ERBB2-222ENST00000584908 SPAG8Q99932 426 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-222ENST00000584908 RHPN1-AS1Q9BWJ2 59 aa12.18□□□□□ -0.46
ERBB2-222ENST00000584908 VSIRQ9H7M9 311 aa12.18□□□□□ -0.46
ERBB2-222ENST00000584908 NBEAL2Q6ZNJ1 2754 aa12.18□□□□□ -0.46
ERBB2-222ENST00000584908 IFNA4P05014 189 aa12.17□□□□□ -0.46
ERBB2-222ENST00000584908 H2AFB2P0C5Z0 115 aa12.17□□□□□ -0.46
ERBB2-222ENST00000584908 IAPPP10997 89 aa12.17□□□□□ -0.46
ERBB2-222ENST00000584908 OR10J1P30954 320 aa12.17□□□□□ -0.46
ERBB2-222ENST00000584908 RPP30P78346 268 aaKnown RBP12.17□□□□□ -0.46
ERBB2-222ENST00000584908 TIGITQ495A1 244 aa12.17□□□□□ -0.46
ERBB2-222ENST00000584908 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
ERBB2-222ENST00000584908 SBSPONQ8IVN8 264 aa12.17□□□□□ -0.46
ERBB2-222ENST00000584908 ZNF431Q8TF32 576 aaPredicted RBP12.17□□□□□ -0.46
ERBB2-222ENST00000584908 NPIPB3Q92617 1050 aa12.17□□□□□ -0.46
ERBB2-222ENST00000584908 MAGT1Q9H0U3 335 aa12.17□□□□□ -0.46
ERBB2-222ENST00000584908 SELENOKQ9Y6D0 94 aa12.17□□□□□ -0.46
ERBB2-222ENST00000584908 PRSS46E5RG02 174 aa12.16□□□□□ -0.46
ERBB2-222ENST00000584908 CD5P06127 495 aa12.16□□□□□ -0.46
ERBB2-222ENST00000584908 NKX2-1P43699 371 aaPredicted RBP12.16□□□□□ -0.46
ERBB2-222ENST00000584908 RAB11AP62491 216 aa12.16□□□□□ -0.46
ERBB2-222ENST00000584908 FAM90A2PQ658T7 463 aa12.16□□□□□ -0.46
ERBB2-222ENST00000584908 RNF2Q99496 336 aa12.16□□□□□ -0.46
ERBB2-222ENST00000584908 WRBO00258 174 aa12.15□□□□□ -0.46
ERBB2-222ENST00000584908 IL5P05113 134 aa12.15□□□□□ -0.46
ERBB2-222ENST00000584908 CRYBB3P26998 211 aa12.15□□□□□ -0.46
ERBB2-222ENST00000584908 BMI1P35226 326 aa12.15□□□□□ -0.46
ERBB2-222ENST00000584908 GAMTQ14353 236 aa12.15□□□□□ -0.46
ERBB2-222ENST00000584908 IAH1Q2TAA2 248 aaPredicted RBP12.15□□□□□ -0.46
ERBB2-222ENST00000584908 ZBTB8BQ8NAP8 495 aaPredicted RBP12.15□□□□□ -0.46
ERBB2-222ENST00000584908 ASCL2Q99929 193 aa12.15□□□□□ -0.46
ERBB2-222ENST00000584908 FAM110AQ9BQ89 295 aa12.15□□□□□ -0.46
ERBB2-222ENST00000584908 SEC22CQ9BRL7 303 aa12.15□□□□□ -0.46
ERBB2-222ENST00000584908 OR11H12B2RN74 326 aa12.14□□□□□ -0.47
ERBB2-222ENST00000584908 TOMM40O96008 361 aa12.14□□□□□ -0.47
ERBB2-222ENST00000584908 NPPCP23582 126 aa12.14□□□□□ -0.47
ERBB2-222ENST00000584908 POLR2GP62487 172 aaKnown RBP eCLIP12.14□□□□□ -0.47
ERBB2-222ENST00000584908 C12orf45Q8N5I9 185 aaPredicted RBP12.14□□□□□ -0.47
ERBB2-222ENST00000584908 ACY3Q96HD9 319 aa12.14□□□□□ -0.47
ERBB2-222ENST00000584908 SMIM8Q96KF7 97 aa12.14□□□□□ -0.47
ERBB2-222ENST00000584908 TM2D3Q9BRN9 247 aa12.14□□□□□ -0.47
ERBB2-222ENST00000584908 U3KQE9 123 aa12.14□□□□□ -0.47
ERBB2-222ENST00000584908 IGHV3-49A0A0A0MS15 119 aa12.13□□□□□ -0.47
ERBB2-222ENST00000584908 APOHP02749 345 aaPredicted RBP12.13□□□□□ -0.47
ERBB2-222ENST00000584908 DEFB125Q8N687 156 aa12.13□□□□□ -0.47
ERBB2-222ENST00000584908 ENKURQ8TC29 256 aa12.13□□□□□ -0.47
ERBB2-222ENST00000584908 Q8WTZ3 238 aa12.13□□□□□ -0.47
ERBB2-222ENST00000584908 ST8SIA2Q92186 375 aa12.13□□□□□ -0.47
ERBB2-222ENST00000584908 SLC35E1Q96K37 410 aa12.13□□□□□ -0.47
ERBB2-222ENST00000584908 WFDC10AQ9H1F0 79 aa12.13□□□□□ -0.47
ERBB2-222ENST00000584908 TUBA4BQ9H853 241 aa12.13□□□□□ -0.47
ERBB2-222ENST00000584908 STRAPQ9Y3F4 350 aaKnown RBP12.13□□□□□ -0.47
ERBB2-222ENST00000584908 U3KQK5 164 aa12.13□□□□□ -0.47
ERBB2-222ENST00000584908 HUWE1Q7Z6Z7 4374 aaKnown RBP12.13□□□□□ -0.47
ERBB2-222ENST00000584908 IGKV1D-37A0A075B6S9 117 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 A0A1W2PS18 150 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 OR4C46A6NHA9 309 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 PAX9P55771 341 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 TAS2R30P59541 319 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 SPANXN5Q5MJ07 72 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 NRARPQ7Z6K4 114 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 LILRB2Q8N423 598 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 METTL26Q96S19 204 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 RAB40CQ96S21 281 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 TMEM231Q9H6L2 316 aa12.12□□□□□ -0.47
ERBB2-222ENST00000584908 RCL1Q9Y2P8 373 aaKnown RBP12.12□□□□□ -0.47
ERBB2-222ENST00000584908 IGHV3OR16-13A0A075B7E8 117 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 IGHV3-74A0A0B4J1X5 117 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 SSSCA1O60232 199 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 RD3LP0DJH9 198 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 PSG1P11464 419 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 HAGHQ16775 308 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 THAP8Q8NA92 274 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 TRGV9Q99603 122 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 SRD5A3Q9H8P0 318 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 PSENENQ9NZ42 101 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 IGKV1OR2-108A0A075B7D4 117 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 TRAV2A0A0B4J234 112 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 RBMY1BA6NDE4 496 aaKnown RBP12.11□□□□□ -0.47
ERBB2-222ENST00000584908 RBMY1EA6NEQ0 496 aaKnown RBP12.11□□□□□ -0.47
ERBB2-222ENST00000584908 PMS2P5A8MQ11 134 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 H3BP45 60 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 CCSO14618 274 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 TSC22D2O75157 780 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 MBPP02686 304 aaPredicted RBP12.11□□□□□ -0.47
ERBB2-222ENST00000584908 IL4P05112 153 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 RBMY1DP0C7P1 496 aaKnown RBP12.11□□□□□ -0.47
ERBB2-222ENST00000584908 DEFA1P59665 94 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 DEFA3P59666 94 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 USF2Q15853 346 aaPredicted RBP12.11□□□□□ -0.47
ERBB2-222ENST00000584908 ODF3L2Q3SX64 289 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 TMEM14EPQ6UXP3 125 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 TCF24Q7RTU0 167 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 OR51G1Q8NGK1 321 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 MARVELD1Q9BSK0 173 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms