RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PLEKHJ1Q9NW61 149 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 COA4Q9NYJ1 87 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 SCP2D1Q9UJQ7 156 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 VPREB3Q9UKI3 123 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF257Q9Y2Q1 563 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ALMS1Q8TCU4 4167 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 A0A096LNT2 108 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 A0A0G2JRQ6 117 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 CLPSL1A2RUU4 121 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 CEACAM18A8MTB9 384 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM14DPA8MWL7 114 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 ODF3BA8MYP8 253 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 NPFFO15130 113 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 MPZL1O95297 269 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 SCGB1C2P0DMR2 95 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 CELP19835 753 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 CDK2P24941 298 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 CDC34P49427 236 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 HCCSP53701 268 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 B2MP61769 119 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 RPS25P62851 125 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 EIF5AP63241 154 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 KISS1Q15726 138 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 RPEL1Q2QD12 228 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TEX43Q6ZNM6 134 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM229BQ8NBD8 167 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF738Q8NE65 137 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 NPBQ8NG41 125 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 OR4M1Q8NGD0 313 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 OR8D4Q8NGM9 314 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 OR4S2Q8NH73 311 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 SCGB1C1Q8TD33 95 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TNFAIP8L1Q8WVP5 186 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF488Q96MN9 340 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM56Q96MV1 263 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TIMM17AQ99595 171 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 PRNDQ9UKY0 176 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 NIPBLQ6KC79 2804 aaeCLIP1.43□□□□□ -2.185e-6■□□□□ 10.4
SMCHD1-211ENST00000584897 A0A1W2PPE3 182 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 A0A1W2PQL4 384 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 ODAMA1E959 279 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 J3QRK9 145 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC31A2O15432 143 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 GNAO1P09471 354 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 OR5AL1P0C617 328 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 SULT1A2P50226 295 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 AP2S1P53680 142 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 FXYD6P3P58550 94 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TAS2R30P59541 319 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 GNG2P59768 71 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 UBE2G2P60604 165 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 MXD1Q05195 221 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TNXAQ16473 311 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 PSG3Q16557 428 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 ACSM3Q53FZ2 586 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TTC32Q5I0X7 151 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 HAGHLQ6PII5 290 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 PLET1Q6UQ28 207 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF497Q6ZNH5 498 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 STX12Q86Y82 276 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC7A6Q92536 515 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 RPUSD4Q96CM3 377 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 GAFA1Q96PS6 74 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TCEAL7Q9BRU2 100 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 GGACTQ9BVM4 153 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC25A31Q9H0C2 315 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 ALX4Q9H161 411 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 OR51B6Q9H340 312 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 OR51J1Q9H342 316 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 LSM2Q9Y333 95 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 WASHC3Q9Y3C0 194 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 NAV3Q8IVL0 2385 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 IGHV3OR16-10A0A075B7F0 116 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 IGHV3-15A0A0B4J1V0 119 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 KIR2DL5BA0A0G2JN68 375 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 KIR2DL5BA0A0G2JPC4 375 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 IFITM5A6NNB3 132 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 GABARAPH6UMI1 98 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 H7C1H1 209 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 MRPS12O15235 138 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 RER1O15258 196 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 CRXO43186 299 aaPredicted RBP1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 MOSP00540 346 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 HLA-DRB1P01911 266 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF688P0C7X2 276 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 LIMS3P0CW19 117 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 LIMS4P0CW20 117 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC25A4P12235 298 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 AZU1P20160 251 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 REG3AQ06141 175 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF616Q08AN1 781 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 RAB31Q13636 194 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 HLA-DRB5Q30154 266 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM255AQ5JRV8 349 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 CLEC12AQ5QGZ9 265 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 FAM27D1Q5T7N8 215 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 IZUMO2Q6UXV1 221 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 CAMK2N1Q7Z7J9 78 aa1.43□□□□□ -2.18
SMCHD1-211ENST00000584897 KIR2DL5AQ8N109 375 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms