RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 ZNF709Q8N972 641 aa9.52□□□□□ -0.89
CDK5RAP3-231ENST00000584063 C5orf17Q8NAS9 161 aa9.52□□□□□ -0.89
CDK5RAP3-231ENST00000584063 LSM10Q969L4 123 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MIEN1Q9BRT3 115 aa9.52□□□□□ -0.89
CDK5RAP3-231ENST00000584063 C19orf24Q9BVV8 132 aa9.52□□□□□ -0.89
CDK5RAP3-231ENST00000584063 RTL8AQ9BWD3 113 aa9.52□□□□□ -0.89
CDK5RAP3-231ENST00000584063 NPCDR1Q9BY65 106 aa9.52□□□□□ -0.89
CDK5RAP3-231ENST00000584063 CACNA1BQ00975 2339 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 LRRC30A6NM36 301 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 SH2D1BO14796 132 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TNFSF13O75888 250 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 PSG5Q15238 335 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 OR2T10Q8NGZ9 312 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 BTF3L4Q96K17 158 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 PSMG3Q9BT73 122 aaPredicted RBP9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 RETNQ9HD89 108 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 LAMTOR2Q9Y2Q5 125 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ITPR1Q14643 2758 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 PLXNB1O43157 2135 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TRAV3A0A0B4J244 114 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 GCGP01275 180 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MYOD1P15172 320 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MORN2Q502X0 79 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TMEM14EPQ6UXP3 125 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 C11orf53Q8IXP5 236 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ABHD12Q8N2K0 398 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 FER1L6-AS1Q8NA97 138 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 OR13A1Q8NGR1 328 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 CIB3Q96Q77 187 aaPredicted RBP9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 KCNIP1Q9NZI2 227 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 DUSP13Q9UII6 198 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 FOXA2Q9Y261 457 aaPredicted RBP9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 FAM215AQ9Y5M1 114 aa9.51□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TINCRA0A1B0GVN0 87 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 OR9G9P0C7N8 305 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 USF1P22415 310 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 GNB1P62873 340 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 RPL8P62917 257 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 SLC35B1P78383 322 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MMDQ15546 238 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 GFRALQ6UXV0 394 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 IL17DQ8TAD2 202 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 IGHV3OR15-7A0A075B7D8 119 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 CTXND1A0A1B0GTU2 59 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 IL3RAP26951 378 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 GPR6P46095 362 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 FAM27E3Q08E93 113 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MSMPQ1L6U9 139 aa9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MRPL16Q9NX20 251 aaKnown RBP9.5□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TET2Q6N021 2002 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 HRASP01112 189 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 RPL39P5Q59GN2 51 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MIC13Q5XKP0 118 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MAP1AP78559 2803 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TRBV6-6A0A0A6YYG2 114 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ZNF705FA8MVS1 300 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 K7ENP7 123 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 PRRG2O14669 202 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 RRHO14718 337 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ZNF705DP0CH99 300 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ZNF705BP0CI00 300 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 COX5AP20674 150 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 KIAA1644Q3SXP7 199 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 FAM201AQ5SY85 155 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 GPR82Q96P67 336 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TMEM147Q9BVK8 224 aa9.49□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TRBV20OR9-2A0A075B6H5 130 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 M0R1B8 84 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 REG1BP48304 166 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 FOXL1Q12952 345 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ZNF645Q8N7E2 425 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 WDR31Q8NA23 367 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 SGMS2Q8NHU3 365 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TMEM242Q9NWH2 141 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 CDC42EP3Q9UKI2 254 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TRAPPC1Q9Y5R8 145 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ANKHD1Q8IWZ3 2542 aaKnown RBP9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 SCO2A0A1W2PP80 73 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 PMS2P5A8MQ11 134 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 F2Z2F3 143 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 CECR9P0C854 216 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 CBLN1P23435 193 aa9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MBNL3Q9NUK0 354 aaKnown RBP9.48□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ARL14EPLP0DKL9 152 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ZNF415Q09FC8 603 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 IQCJQ1A5X6 159 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ACTL10Q5JWF8 245 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 Q8NA96 180 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 RPEQ96AT9 228 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 OR51B2Q9Y5P1 312 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 ZNF146Q15072 292 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MSMO1Q15800 293 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 HLA-DRB5Q30154 266 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 LINC00596Q86U02 117 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TCTEX1D1Q8N7M0 179 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 GNG12Q9UBI6 72 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TANC2Q9HCD6 1990 aa9.47□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TMEM30CPA0ZSE6 113 aa9.46□□□□□ -0.89
CDK5RAP3-231ENST00000584063 C15orf62A8K5M9 175 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms