RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 TCTAP57738 103 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 DEFB131AP59861 70 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 IDNKQ5T6J7 187 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 UBE2UQ5VVX9 321 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 IZUMO2Q6UXV1 221 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 PQLC2Q6ZP29 291 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 TCF24Q7RTU0 167 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 Q8NAQ8 132 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 OR1P1Q8NH06 330 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 TMEM56Q96MV1 263 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 TXN2Q99757 166 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 ZNF2Q9BSG1 426 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 NXF2Q9GZY0 626 aaKnown RBP5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 FXYD6Q9H0Q3 95 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 AUNIPQ9H7T9 357 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 EHFQ9NZC4 300 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 IGHV4-28A0A0C4DH34 117 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 C5orf51A6NDU8 294 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 C15orf61A6NNL5 157 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 C11orf94C9JXX5 98 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 VCYO14598 125 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 GNG7O60262 68 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 DFFBO76075 338 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 MT-CO2P00403 227 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 EIF4EP06730 217 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 RBMY1A1P0DJD3 496 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 RBMY1CP0DJD4 496 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 RFX2P48378 723 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 GABARAPL2P60520 117 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 PAFAH1B2P68402 229 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 RBMY1FQ15415 496 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 Q6ZTC4 211 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 BORCS5Q969J3 196 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 PINX1Q96BK5 328 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 MOB3AQ96BX8 217 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 DGCR14Q96DF8 476 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 MS4A6AQ9H2W1 248 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 IFT46Q9NQC8 304 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 TMEM14BQ9NUH8 114 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 PRNDQ9UKY0 176 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 SSR3Q9UNL2 185 aa5.65□□□□□ -1.5
SMCHD1-210ENST00000583800 IGHV4-4A0A075B6R2 117 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 A0A0A6YYH2 397 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 A0A1B0GVY2 172 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 A6NJ64 397 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 DNASE2O00115 360 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 GPR31O00270 319 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 PMP2P02689 132 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 GIG44P09565 113 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 C4BPBP20851 252 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 HLA-DMBP28068 263 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 CBX5P45973 191 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 PHLDA2Q53GA4 152 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 TOMM20LQ6UXN7 152 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 LINC00336Q6ZUF6 198 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 STHQ8IWL8 128 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 RNASE8Q8TDE3 154 aaKnown RBP5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 TSC22D3Q99576 134 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 GINS3Q9BRX5 216 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 VSIRQ9H7M9 311 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 DIABLOQ9NR28 239 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 RABL2AQ9UBK7 228 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 RABAC1Q9UI14 185 aa5.64□□□□□ -1.51
SMCHD1-210ENST00000583800 TRAV10A0A0B4J240 114 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 LOC100506127A0A0U1RQW1 187 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 IGKV1-39P01597 117 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 IGKV1D-39P04432 117 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 HSPA13P48723 471 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 PRCDQ00LT1 54 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 SPINK9Q5DT21 86 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 DHRS11Q6UWP2 260 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 ZNF767PQ75MW2 155 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 TRPT1Q86TN4 253 aaKnown RBP5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 CMTM1Q8IZ96 169 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 ZNF114Q8NC26 417 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 OR5H2Q8NGV7 314 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 FCGR1BQ92637 280 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 VCX3BQ9H321 246 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 CLEC5AQ9NY25 188 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 FKBP11Q9NYL4 201 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 ANAPC10Q9UM13 185 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 CELA1Q9UNI1 258 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 PUS1Q9Y606 427 aaKnown RBP eCLIP5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 PKD1P98161 4303 aa5.63□□□□□ -1.51
SMCHD1-210ENST00000583800 TRAV2A0A0B4J234 112 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 A0A1B0GU03 582 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 A0A1W2PPQ1 181 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 KNCNA6PVL3 124 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 ZNF705EA8MWA4 302 aaPredicted RBP5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 CD5P06127 495 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 ZNF688P0C7X2 276 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 MIFP14174 115 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 TGFBR1P36897 503 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 TAS2R20P59543 309 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 IZUMO4Q1ZYL8 232 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 MAJINQ3KP22 176 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 PVRIGQ6DKI7 326 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 ZNF600Q6ZNG1 722 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 H2BFWTQ7Z2G1 175 aa5.62□□□□□ -1.51
SMCHD1-210ENST00000583800 DUSP18Q8NEJ0 188 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms