RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 PNRC2Q9NPJ4 139 aaKnown RBP13.55□□□□□ -0.24
ERBB2-214ENST00000583038 CACNA1HO95180 2353 aa13.55□□□□□ -0.24
ERBB2-214ENST00000583038 LTBP1Q14766 1721 aa13.55□□□□□ -0.24
ERBB2-214ENST00000583038 ARL6IP6Q8N6S5 226 aa13.55□□□□□ -0.24
ERBB2-214ENST00000583038 MDS2Q8NDY4 140 aa13.55□□□□□ -0.24
ERBB2-214ENST00000583038 OR13C6PQ8NH95 151 aa13.55□□□□□ -0.24
ERBB2-214ENST00000583038 GPR179Q6PRD1 2367 aa13.55□□□□□ -0.24
ERBB2-214ENST00000583038 SMAD7O15105 426 aaKnown RBP13.54□□□□□ -0.24
ERBB2-214ENST00000583038 RNASE4P34096 147 aaKnown RBP13.54□□□□□ -0.24
ERBB2-214ENST00000583038 WFDC1Q9HC57 220 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 SCN8AQ9UQD0 1980 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 IGKV1-27A0A075B6S5 117 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 PYYP10082 97 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 GCSAMLQ5JQS6 135 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 OR10J3Q5JRS4 329 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 ZCCHC24Q8N2G6 241 aaKnown RBP13.54□□□□□ -0.24
ERBB2-214ENST00000583038 IGHV3OR16-8A0A075B7F1 116 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 ORMDL2Q53FV1 153 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 TMEM14EPQ6UXP3 125 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 FOXL2NBQ6ZUU3 175 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 ST20Q9HBF5 79 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 NBASA2RRP1 2371 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 FAM169BQ8N8A8 192 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 GSN-AS1Q9NRJ2 163 aa13.54□□□□□ -0.24
ERBB2-214ENST00000583038 PSPNO60542 156 aa13.53□□□□□ -0.24
ERBB2-214ENST00000583038 EFNA4P52798 201 aa13.53□□□□□ -0.24
ERBB2-214ENST00000583038 GNG5P63218 68 aa13.53□□□□□ -0.24
ERBB2-214ENST00000583038 FAM19A2Q8N3H0 131 aa13.53□□□□□ -0.24
ERBB2-214ENST00000583038 IGHV2-26A0A0B4J1V2 119 aa13.53□□□□□ -0.24
ERBB2-214ENST00000583038 MBD3L4A6NDZ8 208 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-214ENST00000583038 MBD3L3A6NE82 208 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-214ENST00000583038 MBD3L5A6NJ08 208 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-214ENST00000583038 IFI27P40305 119 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-214ENST00000583038 VDAC2P45880 294 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-214ENST00000583038 SRSF1Q07955 248 aaKnown RBP eCLIP13.53□□□□□ -0.24
ERBB2-214ENST00000583038 FAM71F2Q6NXP2 309 aa13.53□□□□□ -0.24
ERBB2-214ENST00000583038 MBD3L2Q8NHZ7 208 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-214ENST00000583038 GHRHP01286 108 aa13.53□□□□□ -0.24
ERBB2-214ENST00000583038 IGHV1-8P0DP01 117 aa13.53□□□□□ -0.24
ERBB2-214ENST00000583038 TTC32Q5I0X7 151 aa13.53□□□□□ -0.24
ERBB2-214ENST00000583038 LDLRAD2Q5SZI1 272 aa13.53□□□□□ -0.24
ERBB2-214ENST00000583038 TMEM178BH3BS89 294 aa13.52□□□□□ -0.24
ERBB2-214ENST00000583038 LINC00614P0C842 121 aa13.52□□□□□ -0.24
ERBB2-214ENST00000583038 PAX8Q06710 450 aa13.52□□□□□ -0.24
ERBB2-214ENST00000583038 CHCHD1Q96BP2 118 aaKnown RBP13.52□□□□□ -0.24
ERBB2-214ENST00000583038 TRGV2A0A075B6R0 118 aa13.52□□□□□ -0.24
ERBB2-214ENST00000583038 CD7P09564 240 aa13.52□□□□□ -0.24
ERBB2-214ENST00000583038 BMPERQ8N8U9 685 aa13.52□□□□□ -0.24
ERBB2-214ENST00000583038 CYSLTR1Q9Y271 337 aa13.52□□□□□ -0.24
ERBB2-214ENST00000583038 IGHG3P01860 377 aa13.52□□□□□ -0.25
ERBB2-214ENST00000583038 CACNA1BQ00975 2339 aa13.52□□□□□ -0.25
ERBB2-214ENST00000583038 TRGV11A0A075B6L2 103 aa13.52□□□□□ -0.25
ERBB2-214ENST00000583038 FOXL1Q12952 345 aa13.52□□□□□ -0.25
ERBB2-214ENST00000583038 SLC25A48Q6ZT89 311 aaKnown RBP13.52□□□□□ -0.25
ERBB2-214ENST00000583038 MUC21A0A0G2JKD1 596 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 MUC21A0A140T8X8 626 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 A0A1B0GWJ7 208 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST1H2BKO60814 126 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST1H2BJP06899 126 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST1H2BOP23527 126 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST1H2BBP33778 126 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 CMC4P56277 68 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST1H2BDP58876 126 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST1H2BCP62807 126 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 PLAURQ03405 335 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST2H2BEQ16778 126 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-214ENST00000583038 MUC21Q5SSG8 566 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 SPSB3Q6PJ21 355 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 C20orf204Q6ZNR8 217 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 OR5AN1Q8NGI8 311 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST1H2BHQ93079 126 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 TRGV9Q99603 122 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST1H2BNQ99877 126 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 HIST1H2BMQ99879 126 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 VCX2Q9H322 139 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 CYTL1Q9NRR1 136 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 BEX4Q9NWD9 120 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-214ENST00000583038 NDUFAF3Q9BU61 184 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 ADMP35318 185 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 LYNX1G3V0Z9 82 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 LYNX1P0DP58 116 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 RASL11AQ6T310 242 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 MBNL3Q9NUK0 354 aaKnown RBP13.51□□□□□ -0.25
ERBB2-214ENST00000583038 LY96Q9Y6Y9 160 aa13.51□□□□□ -0.25
ERBB2-214ENST00000583038 TRAV9-2A0A087WT02 112 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 SRSF3P84103 164 aaKnown RBP13.5□□□□□ -0.25
ERBB2-214ENST00000583038 SRSF4Q08170 494 aaKnown RBP13.5□□□□□ -0.25
ERBB2-214ENST00000583038 C5orf30Q96GV9 206 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 CNTFRP26992 372 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 LAMTOR2Q9Y2Q5 125 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 COL6A6A6NMZ7 2263 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 TRAV41A0A0B4J266 112 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 IGKV1-5P01602 117 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 QRFPP83859 136 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 NIT1Q86X76 327 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 A0A1B0GV90 55 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 STHQ8IWL8 128 aa13.5□□□□□ -0.25
ERBB2-214ENST00000583038 TRPM7Q96QT4 1865 aa13.49□□□□□ -0.25
ERBB2-214ENST00000583038 ASCL4Q6XD76 172 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms