RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PRSS54Q6PEW0 395 aa9.47□□□□□ -0.89
SMARCE1-218ENST00000582955 SBSPONQ8IVN8 264 aa9.47□□□□□ -0.89
SMARCE1-218ENST00000582955 TMEM116Q8NCL8 245 aa9.47□□□□□ -0.89
SMARCE1-218ENST00000582955 RHPN1-AS1Q9BWJ2 59 aa9.47□□□□□ -0.89
SMARCE1-218ENST00000582955 TBC1D24Q9ULP9 559 aa9.47□□□□□ -0.89
SMARCE1-218ENST00000582955 IGHV3OR16-13A0A075B7E8 117 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 IGHV3-74A0A0B4J1X5 117 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 OR11H12B2RN74 326 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 UPK1BO75841 260 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 H2AFB2P0C5Z0 115 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 OR10J1P30954 320 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 ATP5IP56385 69 aaPredicted RBP9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 RAB11AP62491 216 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 DEFB125Q8N687 156 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 OR1S2Q8NGQ3 325 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 NPIPB3Q92617 1050 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 CIB3Q96Q77 187 aaPredicted RBP9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 SPAG8Q99932 426 aaPredicted RBP9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 WFDC10AQ9H1F0 79 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 ZFAND3Q9H8U3 227 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 C19orf73Q9NVV2 129 aa9.46□□□□□ -0.9
SMARCE1-218ENST00000582955 A8MZ25 164 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 CHEK1O14757 476 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 TSPAN4O14817 238 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 SCGB1D2O95969 90 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 IGKV1-17P01599 117 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 IGLC1P0CG04 106 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 BMI1P35226 326 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 NKX2-1P43699 371 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 RPP30P78346 268 aaKnown RBP9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 ASAH1Q13510 395 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 ENKURQ8TC29 256 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 MITD1Q8WV92 249 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 SLC35E1Q96K37 410 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 RNF2Q99496 336 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 SEC22CQ9BRL7 303 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 U3KQK5 164 aa9.45□□□□□ -0.9
SMARCE1-218ENST00000582955 IGKV3-7A0A075B6H7 116 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 IGHV3-66A0A0C4DH42 116 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 H3BP45 60 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 POLR2GP62487 172 aaKnown RBP eCLIP9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 ID3Q02535 119 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 IAH1Q2TAA2 248 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 SPANXN5Q5MJ07 72 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 OR4D5Q8NGN0 318 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 ZNF431Q8TF32 576 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 Q8WTZ3 238 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 ST8SIA2Q92186 375 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 METTL26Q96S19 204 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 ZMAT4Q9H898 229 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 SRD5A3Q9H8P0 318 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 GSKIPQ9P0R6 139 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 COL7A1Q02388 2944 aa9.44□□□□□ -0.9
SMARCE1-218ENST00000582955 OR4C46A6NHA9 309 aa9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 CCSO14618 274 aa9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 SSSCA1O60232 199 aa9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 APOHP02749 345 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 NPPCP23582 126 aa9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 GPX4P36969 197 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 TFPI2P48307 235 aa9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 YPEL3P61236 119 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 TCF24Q7RTU0 167 aa9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 NARS2Q96I59 477 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 TMEM231Q9H6L2 316 aa9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 UBQLN2Q9UHD9 624 aa9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 STRAPQ9Y3F4 350 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-218ENST00000582955 A0A1W2PS18 150 aa9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 ZFP92A6NM28 416 aa9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 FAM25EA8MYX2 175 aa9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 IL4P05112 153 aa9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 RD3LP0DJH9 198 aa9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 RPL11P62913 178 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 GAMTQ14353 236 aa9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 C12orf45Q8N5I9 185 aaPredicted RBP9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 ZBTB8BQ8NAP8 495 aaPredicted RBP9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 RCHY1Q96PM5 261 aa9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 VSIRQ9H7M9 311 aa9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 PSENENQ9NZ42 101 aa9.42□□□□□ -0.9
SMARCE1-218ENST00000582955 RBMY1BA6NDE4 496 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 C5orf51A6NDU8 294 aa9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 RBMY1EA6NEQ0 496 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 TOMM40O96008 361 aa9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 CD5P06127 495 aa9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 RBMY1DP0C7P1 496 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 CRYBB3P26998 211 aa9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 PAFAH1B2P68402 229 aa9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 IFITM3Q01628 133 aa9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 HAGHQ16775 308 aa9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 GBGT1Q8N5D6 347 aa9.41□□□□□ -0.9
SMARCE1-218ENST00000582955 DNASE2O00115 360 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 DFFBO76075 338 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 FABP1P07148 127 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 HNRNPCP07910 306 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 PSG1P11464 419 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 P2RY1P47900 373 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 DEFA1P59665 94 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 DEFA3P59666 94 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 USF2Q15853 346 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 FAM90A2PQ658T7 463 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms