RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 NAA60Q9H7X0 242 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 SDHAF2Q9NX18 166 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 COMMD9Q9P000 198 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 S4R3C0 116 aa5.58□□□□□ -1.52
CCDC47-205ENST00000582331 TEX13DA0A0J9YY54 714 aaPredicted RBP5.57□□□□□ -1.52
CCDC47-205ENST00000582331 FAM25EA8MYX2 175 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 M0R2N4 97 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 DEFB4AO15263 64 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 S1PR2O95136 353 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 CRYZL1O95825 349 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 PPYP01298 95 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 CTXN2P0C2S0 81 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 MYOD1P15172 320 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 PIGPP57054 158 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 ZNF345Q14585 488 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 ODF3L2Q3SX64 289 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 C10orf55Q5SWW7 151 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 ACOT7LQ6ZUV0 252 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 ZNF575Q86XF7 245 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 MMD2Q8IY49 270 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 LRTM2Q8N967 370 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 THAP6Q8TBB0 222 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 CD300LFQ8TDQ1 290 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 CABLES2Q9BTV7 478 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 OR2D2Q9H210 308 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 ZNF430Q9H8G1 570 aaPredicted RBP5.57□□□□□ -1.52
CCDC47-205ENST00000582331 MBD2Q9UBB5 411 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 UFC1Q9Y3C8 167 aa5.57□□□□□ -1.52
CCDC47-205ENST00000582331 IGHV4-4A0A075B6R2 117 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 TRBV7-1A0A0A6YYK4 115 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 IGKV1D-13A0A0B4J2D9 117 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 OR4C46A6NHA9 309 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 NPIPB5A8MRT5 1133 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 BCL2L11O43521 198 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 CLEC3BP05452 202 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 HOXB5P09067 269 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 IGKV1-13P0DP09 117 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 HIST1H1BP16401 226 aaKnown RBP5.56□□□□□ -1.52
CCDC47-205ENST00000582331 GNRHRP30968 328 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 FXYD4P59646 89 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 HERV-K104P61576 105 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 RND3P61587 244 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 SP6Q3SY56 376 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 LRRC37A5PQ49AS3 106 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 PHLDA2Q53GA4 152 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 GGNBP1Q5YKI7 109 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 PRSS54Q6PEW0 395 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 C19orf35Q6ZS72 473 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 SLC51BQ86UW2 128 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 APRG1Q8IVJ8 170 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 H1FOOQ8IZA3 346 aaPredicted RBP5.56□□□□□ -1.52
CCDC47-205ENST00000582331 ZNF645Q8N7E2 425 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 POM121L12Q8N7R1 296 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 MAPKAPK5-AS1Q8N8E1 139 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 OSR1Q8TAX0 266 aaPredicted RBP5.56□□□□□ -1.52
CCDC47-205ENST00000582331 SCARB1Q8WTV0 552 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 GLYATL2Q8WU03 294 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 RRNAD1Q96FB5 475 aaKnown RBP5.56□□□□□ -1.52
CCDC47-205ENST00000582331 ADTRPQ96IZ2 230 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 SLC2A9Q9NRM0 540 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 KCNIP3Q9Y2W7 256 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 HERC1Q15751 4861 aa5.56□□□□□ -1.52
CCDC47-205ENST00000582331 TRAV10A0A0B4J240 114 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 IGHV3-35A0A0C4DH35 117 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 TEX22C9J3V5 150 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 DIRAS3O95661 229 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 CRYGCP07315 174 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 NMBP08949 121 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 OR5AC1P0C628 307 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 SAA1P0DJI8 122 aaPredicted RBP5.55□□□□□ -1.52
CCDC47-205ENST00000582331 P0DMU3 169 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 FAM231AP0DMU4 169 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 FAM231CP0DMU5 169 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 AP2S1P53680 142 aaPredicted RBP5.55□□□□□ -1.52
CCDC47-205ENST00000582331 CMC4P56277 68 aaPredicted RBP5.55□□□□□ -1.52
CCDC47-205ENST00000582331 RAB32Q13637 225 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 IAH1Q2TAA2 248 aaPredicted RBP5.55□□□□□ -1.52
CCDC47-205ENST00000582331 LGALS9BQ3B8N2 356 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 PVRIGQ6DKI7 326 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 LGI3Q8N145 548 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 CCDC71LQ8N9Z2 235 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 OR4A4PQ8NGN8 299 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 OR1S1Q8NH92 325 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 LHFPL5Q8TAF8 219 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 PCNPQ8WW12 178 aaKnown RBP5.55□□□□□ -1.52
CCDC47-205ENST00000582331 ST8SIA2Q92186 375 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 C5orf30Q96GV9 206 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 CXorf58Q96LI9 332 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 SLC5A7Q9GZV3 580 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 HRH4Q9H3N8 390 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 CCL28Q9NRJ3 127 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 CYTL1Q9NRR1 136 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 OR5AC2Q9NZP5 309 aa5.55□□□□□ -1.52
CCDC47-205ENST00000582331 RBM7Q9Y580 266 aaKnown RBP5.55□□□□□ -1.52
CCDC47-205ENST00000582331 C3orf85A0A1B0GTC6 90 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 GPR31O00270 319 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 BET1O15155 118 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 CDK2AP2O75956 126 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 IFNA21P01568 189 aa5.54□□□□□ -1.52
CCDC47-205ENST00000582331 IL6RP08887 468 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms