RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 STPG3Q8N7X2 389 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 OR5T1Q8NG75 326 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 LYPD6BQ8NI32 183 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 ZFP92A6NM28 416 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 HBE1P02100 147 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 AMY1AP04745 511 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 CRYBA1P05813 215 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 IER3P46695 156 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 RPL29P47914 159 aaKnown RBP9.86□□□□□ -0.83
SRSF1-204ENST00000581979 FAM122CQ6P4D5 195 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 BPIFCQ8NFQ6 507 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 OR4F5Q8NH21 305 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 OR5R1Q8NH85 324 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 SFT2D1Q8WV19 159 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 ACTR3CQ9C0K3 210 aaPredicted RBP9.86□□□□□ -0.83
SRSF1-204ENST00000581979 TNFRSF19Q9NS68 423 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 SLC39A9Q9NUM3 307 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 MRPL36Q9P0J6 103 aaKnown RBP9.86□□□□□ -0.83
SRSF1-204ENST00000581979 TRRAPQ9Y4A5 3859 aa9.86□□□□□ -0.83
SRSF1-204ENST00000581979 IGKV1OR2-108A0A075B7D4 117 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 RAB19A4D1S5 217 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 LINC01548A6NM66 108 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 I3L2K1 104 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 ZNF726P1Q15940 193 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 CYP2G1PQ6ZSU1 146 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 EIF4E3Q8N5X7 224 aaKnown RBP9.85□□□□□ -0.83
SRSF1-204ENST00000581979 THAP8Q8NA92 274 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 FAM110DQ8TAY7 271 aaPredicted RBP9.85□□□□□ -0.83
SRSF1-204ENST00000581979 RCC1LQ96I51 464 aaKnown RBP9.85□□□□□ -0.83
SRSF1-204ENST00000581979 TMEM68Q96MH6 324 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 THYN1Q9P016 225 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 SLC45A2Q9UMX9 530 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 IGLV11-55A0A075B6I3 123 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 I3L521 148 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 YIF1AO95070 293 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 PRR20EP86478 221 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 PRR20CP86479 221 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 PRR20DP86480 221 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 PRR20BP86481 221 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 PRR20AP86496 221 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 SPSB3Q6PJ21 355 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 LCN15Q6UWW0 184 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 SSX7Q7RTT5 188 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 RPP25LQ8N5L8 163 aaKnown RBP9.85□□□□□ -0.83
SRSF1-204ENST00000581979 COMMD1Q8N668 190 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 WFDC12Q8WWY7 111 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 FANCD2OSQ96PS1 177 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 SLC25A22Q9H936 323 aa9.85□□□□□ -0.83
SRSF1-204ENST00000581979 MEGF8Q7Z7M0 2845 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 CTXND1A0A1B0GTU2 59 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 A0A1W2PPV4 95 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 TCRBV4S1A1TA0A5B7 111 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 MAP1LC3B2A6NCE7 125 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 G3V318 75 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 K7EIM0 57 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 OR2J3O76001 311 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 HIST1H1BP16401 226 aaKnown RBP9.84□□□□□ -0.83
SRSF1-204ENST00000581979 GATA2P23769 480 aaPredicted RBP9.84□□□□□ -0.83
SRSF1-204ENST00000581979 CDC34P49427 236 aaPredicted RBP9.84□□□□□ -0.83
SRSF1-204ENST00000581979 AKIRIN2Q53H80 203 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 GCSAMLQ5JQS6 135 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 UQCC3Q6UW78 93 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 SLC35E3Q7Z769 313 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 TMEM116Q8NCL8 245 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 MBD3L1Q8WWY6 194 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 MAP1LC3BQ9GZQ8 125 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 ZNF355PQ9NSJ1 428 aa9.84□□□□□ -0.83
SRSF1-204ENST00000581979 IGKV1D-37A0A075B6S9 117 aa9.83□□□□□ -0.84
SRSF1-204ENST00000581979 TRAV41A0A0B4J266 112 aa9.83□□□□□ -0.84
SRSF1-204ENST00000581979 CLPSL1A2RUU4 121 aa9.83□□□□□ -0.84
SRSF1-204ENST00000581979 EIF3GO75821 320 aaKnown RBP eCLIP9.83□□□□□ -0.84
SRSF1-204ENST00000581979 LINC00869P0C866 280 aa9.83□□□□□ -0.84
SRSF1-204ENST00000581979 FGF8P55075 233 aaPredicted RBP9.83□□□□□ -0.84
SRSF1-204ENST00000581979 OR4X1Q8NH49 305 aa9.83□□□□□ -0.84
SRSF1-204ENST00000581979 ANKRD34BA5PLL1 514 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 HMGB3O15347 200 aaKnown RBP9.82□□□□□ -0.84
SRSF1-204ENST00000581979 NDUFB8O95169 186 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 IGHG2P01859 326 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 CRIP2P52943 208 aaPredicted RBP9.82□□□□□ -0.84
SRSF1-204ENST00000581979 SELENOTP62341 195 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 BLCAPP62952 87 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 CCL20P78556 96 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 ZNF90Q03938 601 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 RAB24Q969Q5 203 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 FAM210AQ96ND0 272 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 TRGV9Q99603 122 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 PBDC1Q9BVG4 233 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 TMEM231Q9H6L2 316 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 TREM1Q9NP99 234 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 LINC00527Q9UJ94 153 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 FBXL7Q9UJT9 491 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 VPREB3Q9UKI3 123 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 TRAV1-1A0A0B4J248 108 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 SEC14L6B5MCN3 397 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 CLN5O75503 358 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 RHOBP62745 196 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 SRSF3P84103 164 aaKnown RBP9.82□□□□□ -0.84
SRSF1-204ENST00000581979 DEFA5Q01523 94 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 GUK1Q16774 197 aa9.82□□□□□ -0.84
SRSF1-204ENST00000581979 TOR2AQ5JU69 321 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms