RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ECSCRQ19T08 205 aa10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 BSXQ3C1V8 233 aa10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 AKIRIN2Q53H80 203 aa10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 TEX38Q6PEX7 206 aa10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 ZNF114Q8NC26 417 aa10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 SRSF12Q8WXF0 261 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 RSG1Q9BU20 258 aa10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 LINC00527Q9UJ94 153 aa10.56□□□□□ -0.72
CSNK1D-220ENST00000581737 CTXND1A0A1B0GTU2 59 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 OPN1MWP04001 364 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 OPN1MW2P0DN77 364 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 OPN1MW3P0DN78 364 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 OR13C7P0DN81 318 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 RNASE2P10153 161 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 M6PRP20645 277 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 ELLP55199 621 aaPredicted RBP10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 SSBP2P81877 361 aaPredicted RBP10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 FOXE3Q13461 319 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 MRGPRG-AS1Q2M3A8 158 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 FFAR4Q5NUL3 377 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 UNQ5815/PRO19632Q6UWF5 114 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 SFT2D1Q8WV19 159 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 CITED1Q99966 193 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 EIF5A2Q9GZV4 153 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 SLC39A9Q9NUM3 307 aa10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 TET2Q6N021 2002 aaPredicted RBP10.55□□□□□ -0.72
CSNK1D-220ENST00000581737 PRSS46E5RG02 174 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 SCGB2A1O75556 95 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 IGHG4P01861 327 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 ELANEP08246 267 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 CFHR3Q02985 330 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 CD69Q07108 199 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 GUK1Q16774 197 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 SLC16A13Q7RTY0 426 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 TMEM144Q7Z5S9 345 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 ZNF329Q86UD4 541 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 MBD3L1Q8WWY6 194 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 FAM103A1Q9BTL3 118 aaKnown RBP10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 DNAH9Q9NYC9 4486 aa10.54□□□□□ -0.72
CSNK1D-220ENST00000581737 A0A1W2PPV4 95 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 TMEM218A2RU14 115 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 MAP1LC3B2A6NCE7 125 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 G3V318 75 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 EGR2P11161 476 aaPredicted RBP10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 PPIFP30405 207 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 CDC34P49427 236 aaPredicted RBP10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 C19orf54Q5BKX5 351 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 C10orf55Q5SWW7 151 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 SVBPQ8N300 66 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 BPIFCQ8NFQ6 507 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 OR10G4Q8NGN3 311 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 OR10G9Q8NGN4 311 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 OR10G7Q8NGN6 311 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 OR1P1Q8NH06 330 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 RNF2Q99496 336 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 P2RX4Q99571 388 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 MAP1LC3BQ9GZQ8 125 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 RPRMQ9NS64 109 aa10.53□□□□□ -0.72
CSNK1D-220ENST00000581737 TCRBV4S1A1TA0A5B7 111 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 F8W036 122 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 H3BUA1 57 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 AGPAT2O15120 278 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 FABP1P07148 127 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 CD28P10747 220 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 RPL29P47914 159 aaKnown RBP10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 SELENOTP62341 195 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 KHDC1LQ5JSQ8 128 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 NDUFA11Q86Y39 141 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 RNF152Q8N8N0 203 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 C11orf44Q8N8P7 122 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 FAM110DQ8TAY7 271 aaPredicted RBP10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 RCC1LQ96I51 464 aaKnown RBP10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 SEC11CQ9BY50 192 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 MANBALQ9NQG1 85 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 TSSC4Q9Y5U2 329 aaPredicted RBP10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 PXMP4Q9Y6I8 212 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 WNK1Q9H4A3 2382 aa10.52□□□□□ -0.73
CSNK1D-220ENST00000581737 NDUFS6O75380 124 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 SNAPINO95295 136 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 IGLV1-40P01703 118 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 APOC3P02656 99 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 PF4V1P10720 104 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 MYOD1P15172 320 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 PSMB8P28062 276 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 FHITP49789 147 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 B2MP61769 119 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 RHOBP62745 196 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 PMS2P11Q13670 270 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 KHDC3LQ587J8 217 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 C10orf99Q6UWK7 81 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 LINC00052Q96N35 136 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 CITED2Q99967 270 aaPredicted RBP10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 GGTLC1Q9BX51 225 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 LSM4Q9Y4Z0 139 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-220ENST00000581737 IGLC7A0M8Q6 106 aa10.5□□□□□ -0.73
CSNK1D-220ENST00000581737 RBFOX3A6NFN3 312 aa10.5□□□□□ -0.73
CSNK1D-220ENST00000581737 NPIPB5A8MRT5 1133 aa10.5□□□□□ -0.73
CSNK1D-220ENST00000581737 SEC14L6B5MCN3 397 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms