RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 RPEQ96AT9 228 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PRNDQ9UKY0 176 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 IGHV1-3A0A0C4DH29 117 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 XKRY2A2RUG3 117 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 USF1P22415 310 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 NPPCP23582 126 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 C16orf82Q7Z2V1 217 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 OR11H6Q8NGC7 330 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PARLQ9H300 379 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 RNF24Q9Y225 148 aa10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 SOX21Q9Y651 276 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ITPR3Q14573 2671 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 LY6LH3BQJ8 138 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PFN1P07737 140 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 HTR1DP28221 377 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ZNF137PP52743 207 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 COA6Q5JTJ3 125 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 Q5PR19 223 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 MGST2Q99735 147 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 UPK2O00526 184 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 KBTBD11O94819 623 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 HNF1AP20823 631 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 FLYWCH2Q96CP2 140 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 P2RX4Q99571 388 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PYGO2Q9BRQ0 406 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 SPXQ9BT56 116 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TPSG1Q9NRR2 321 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PXMP4Q9Y6I8 212 aa10.17□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TIMM23O14925 209 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ATP5G3P48201 142 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ARSJQ5FYB0 599 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 RUSC1-AS1Q66K80 236 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ATG101Q9BSB4 218 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 COMMD5Q9GZQ3 224 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 NPVFQ9HCQ7 196 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 DPM3Q9P2X0 92 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 A0A096LNT2 108 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ODF3BA8MYP8 253 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 MPDU1O75352 247 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 GCGP01275 180 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 ACANP16112 2415 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 RPL23P62829 140 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 CST9LP1Q5W188 147 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 BRD3OSQ6XYD6 125 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PIP4P2Q8N4L2 257 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 OR10W1Q8NGF6 305 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TMEM68Q96MH6 324 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 GGTLC1Q9BX51 225 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 HIF1ANQ9NWT6 349 aa10.16□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TEX50A0A1B0GTY4 177 aa10.15□□□□□ -0.78
CDK5RAP3-217ENST00000580287 A0A1W2PPI3 338 aa10.15□□□□□ -0.78
CDK5RAP3-217ENST00000580287 PRSS46E5RG02 174 aa10.15□□□□□ -0.78
CDK5RAP3-217ENST00000580287 AVPP01185 164 aa10.15□□□□□ -0.78
CDK5RAP3-217ENST00000580287 IL3RAP26951 378 aa10.15□□□□□ -0.78
CDK5RAP3-217ENST00000580287 POU2AF1Q16633 256 aa10.15□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TPTE2P1Q5T6R2 138 aa10.15□□□□□ -0.78
CDK5RAP3-217ENST00000580287 TEPPQ6URK8 271 aa10.15□□□□□ -0.78
CDK5RAP3-217ENST00000580287 Q96MF0 132 aa10.15□□□□□ -0.78
CDK5RAP3-217ENST00000580287 NAT8Q9UHE5 227 aa10.15□□□□□ -0.78
CDK5RAP3-217ENST00000580287 FLNBO75369 2602 aaKnown RBP10.15□□□□□ -0.79
CDK5RAP3-217ENST00000580287 MSMBP08118 114 aa10.15□□□□□ -0.79
CDK5RAP3-217ENST00000580287 CHRNA7P36544 502 aa10.15□□□□□ -0.79
CDK5RAP3-217ENST00000580287 PRCDQ00LT1 54 aa10.15□□□□□ -0.79
CDK5RAP3-217ENST00000580287 KRTAP1-3Q8IUG1 177 aa10.15□□□□□ -0.79
CDK5RAP3-217ENST00000580287 OSR1Q8TAX0 266 aaPredicted RBP10.15□□□□□ -0.79
CDK5RAP3-217ENST00000580287 MANBALQ9NQG1 85 aa10.15□□□□□ -0.79
CDK5RAP3-217ENST00000580287 WASHC3Q9Y3C0 194 aa10.15□□□□□ -0.79
CDK5RAP3-217ENST00000580287 FLNAP21333 2647 aaKnown RBP10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TRAV34A0A0B4J273 112 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 CENPVL3A0A0U1RRI6 287 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 A0A1W2PPQ1 181 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 HSBP1L1C9JCN9 74 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 E7EUB6 86 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 OPRK1P41145 380 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 LGALS4P56470 323 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 PAX8Q06710 450 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TMEM241Q24JQ0 296 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 BSXQ3C1V8 233 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 C10orf55Q5SWW7 151 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 CYP2G1PQ6ZSU1 146 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 KIR3DL3Q8N743 410 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 WFDC11Q8NEX6 87 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 OR4C13Q8NGP0 309 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 C11orf94C9JXX5 98 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 SAA4P35542 130 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 GALR1P47211 349 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 RPL8P62917 257 aaKnown RBP10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 RAB31Q13636 194 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 SPATA31B1PQ5VZV4 182 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 ZNF114Q8NC26 417 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 SNHG12Q9BXW3 62 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 C7orf69Q9H7B7 122 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 FKBP11Q9NYL4 201 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 BET1LQ9NYM9 111 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 MXRA5Q9NR99 2828 aa10.14□□□□□ -0.79
CDK5RAP3-217ENST00000580287 PPP5D1E7EU14 171 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 IGLV2-23P01705 113 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 IL6RP08887 468 aaPredicted RBP10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 IGHV4-38-2P0DP08 117 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 FAM3BP58499 235 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms