RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 SLC25A24Q6NUK1 477 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 CEMP1Q6PRD7 247 aaPredicted RBP9.95□□□□□ -0.82
TRAF4-214ENST00000580073 UNQ9165/PRO28630Q6UXU0 137 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 ZNF114Q8NC26 417 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 COQ8AQ8NI60 647 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 ZNF414Q96IQ9 312 aa9.95□□□□□ -0.82
TRAF4-214ENST00000580073 NDUFA4O00483 81 aa9.94□□□□□ -0.82
TRAF4-214ENST00000580073 SLC25A6P12236 298 aa9.94□□□□□ -0.82
TRAF4-214ENST00000580073 HOXA1P49639 335 aaPredicted RBP9.94□□□□□ -0.82
TRAF4-214ENST00000580073 CMC4P56277 68 aaPredicted RBP9.94□□□□□ -0.82
TRAF4-214ENST00000580073 C12orf45Q8N5I9 185 aaPredicted RBP9.94□□□□□ -0.82
TRAF4-214ENST00000580073 OR4D5Q8NGN0 318 aa9.94□□□□□ -0.82
TRAF4-214ENST00000580073 OR1P1Q8NH06 330 aa9.94□□□□□ -0.82
TRAF4-214ENST00000580073 OR1S1Q8NH92 325 aa9.94□□□□□ -0.82
TRAF4-214ENST00000580073 CEBPZOSA8MTT3 80 aa9.93□□□□□ -0.82
TRAF4-214ENST00000580073 I3L2K1 104 aa9.93□□□□□ -0.82
TRAF4-214ENST00000580073 IGHV3-48P01763 117 aa9.93□□□□□ -0.82
TRAF4-214ENST00000580073 ERHP84090 104 aaKnown RBP9.93□□□□□ -0.82
TRAF4-214ENST00000580073 RELQ04864 619 aaPredicted RBP9.93□□□□□ -0.82
TRAF4-214ENST00000580073 RNF183Q96D59 192 aa9.93□□□□□ -0.82
TRAF4-214ENST00000580073 PDCD10Q9BUL8 212 aa9.93□□□□□ -0.82
TRAF4-214ENST00000580073 MFFQ9GZY8 342 aa9.93□□□□□ -0.82
TRAF4-214ENST00000580073 MAGT1Q9H0U3 335 aa9.93□□□□□ -0.82
TRAF4-214ENST00000580073 FNDC4Q9H6D8 234 aaPredicted RBP9.93□□□□□ -0.82
TRAF4-214ENST00000580073 MRPL36Q9P0J6 103 aaKnown RBP9.93□□□□□ -0.82
TRAF4-214ENST00000580073 OR2T8A6NH00 312 aa9.92□□□□□ -0.82
TRAF4-214ENST00000580073 K7EMT4 169 aa9.92□□□□□ -0.82
TRAF4-214ENST00000580073 IAPPP10997 89 aa9.92□□□□□ -0.82
TRAF4-214ENST00000580073 ID3Q02535 119 aa9.92□□□□□ -0.82
TRAF4-214ENST00000580073 ZBTB8BQ8NAP8 495 aaPredicted RBP9.92□□□□□ -0.82
TRAF4-214ENST00000580073 SCARB1Q8WTV0 552 aa9.92□□□□□ -0.82
TRAF4-214ENST00000580073 GATAD1Q8WUU5 269 aa9.92□□□□□ -0.82
TRAF4-214ENST00000580073 C21orf62Q9NYP8 219 aa9.92□□□□□ -0.82
TRAF4-214ENST00000580073 UBQLN2Q9UHD9 624 aa9.92□□□□□ -0.82
TRAF4-214ENST00000580073 SELENOKQ9Y6D0 94 aa9.92□□□□□ -0.82
TRAF4-214ENST00000580073 IGHV3-35A0A0C4DH35 117 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 C15orf62A8K5M9 175 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 SIX6O95475 246 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 TMEM50AO95807 157 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 PTTG1O95997 202 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 MT-CO2P00403 227 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 CD5P06127 495 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 IL15RAQ13261 267 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 DTD1Q8TEA8 209 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 MISP3Q96FF7 219 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 C20orf24Q9BUV8 137 aa9.91□□□□□ -0.82
TRAF4-214ENST00000580073 HEYLQ9NQ87 328 aaPredicted RBP9.91□□□□□ -0.82
TRAF4-214ENST00000580073 SNRPGP15A8MWD9 76 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 NUPL2O15504 423 aaKnown RBP9.9□□□□□ -0.82
TRAF4-214ENST00000580073 SNCAP37840 140 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 PAX9P55771 341 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 POLR2GP62487 172 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRAF4-214ENST00000580073 IAH1Q2TAA2 248 aaPredicted RBP9.9□□□□□ -0.82
TRAF4-214ENST00000580073 ODF3L2Q3SX64 289 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 C2orf83Q53S99 150 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 Q56UQ5 140 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 LGALS9CQ6DKI2 356 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 UBAC2Q8NBM4 344 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 CHRDL1Q9BU40 450 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 MAP6D1Q9H9H5 199 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 ENY2Q9NPA8 101 aa9.9□□□□□ -0.82
TRAF4-214ENST00000580073 PIGBOS1A0A0B4J2F0 54 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 C7orf66A4D0T2 115 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 FAM90A26D6RGX4 464 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 SYNGR2O43760 224 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 PRAF2O60831 178 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 IFNA21P01568 189 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 MBPP02686 304 aaPredicted RBP9.89□□□□□ -0.83
TRAF4-214ENST00000580073 ADMP35318 185 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 TCTAP57738 103 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 PAFAH1B2P68402 229 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 SLC24A4Q8NFF2 622 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 PHLDA1Q8WV24 401 aaPredicted RBP9.89□□□□□ -0.83
TRAF4-214ENST00000580073 PINX1Q96BK5 328 aaKnown RBP9.89□□□□□ -0.83
TRAF4-214ENST00000580073 GINS3Q9BRX5 216 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 C11orf68Q9H3H3 251 aaKnown RBP9.89□□□□□ -0.83
TRAF4-214ENST00000580073 C11orf1Q9H5F2 150 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 GSKIPQ9P0R6 139 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 RCL1Q9Y2P8 373 aaKnown RBP9.89□□□□□ -0.83
TRAF4-214ENST00000580073 ALG5Q9Y673 324 aa9.89□□□□□ -0.83
TRAF4-214ENST00000580073 FAM25EA8MYX2 175 aa9.88□□□□□ -0.83
TRAF4-214ENST00000580073 WRBO00258 174 aa9.88□□□□□ -0.83
TRAF4-214ENST00000580073 RPL35AP18077 110 aaKnown RBP9.88□□□□□ -0.83
TRAF4-214ENST00000580073 NPY1RP25929 384 aa9.88□□□□□ -0.83
TRAF4-214ENST00000580073 HTR2BP41595 481 aa9.88□□□□□ -0.83
TRAF4-214ENST00000580073 NKX2-1P43699 371 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-214ENST00000580073 OXA1LQ15070 435 aa9.88□□□□□ -0.83
TRAF4-214ENST00000580073 GPN1Q9HCN4 374 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-214ENST00000580073 C5orf51A6NDU8 294 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 PRSS46E5RG02 174 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 CCNKO75909 580 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 IFNA10P01566 189 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 IFNA4P05014 189 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 CTSGP08311 255 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 TMEM116Q8NCL8 245 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 C2orf50Q96LR7 162 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 TXN2Q99757 166 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 RARRES2Q99969 163 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 CSTL1Q9H114 145 aa9.87□□□□□ -0.83
TRAF4-214ENST00000580073 U3KQ87 197 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms