RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 CDK5Q00535 292 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 ATP5G2Q06055 141 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 REG3AQ06141 175 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 TPBGQ13641 420 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 DIAPH2-AS1Q14236 149 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 FXYD3Q14802 87 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 KISS1Q15726 138 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 RNF212Q495C1 297 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 NXNL2Q5VZ03 156 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 OR2T5Q6IEZ7 315 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 GPHB5Q86YW7 130 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 SUMF2Q8NBJ7 301 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 OR10G2Q8NGC3 310 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 OR51A2Q8NGJ7 313 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 OR8D4Q8NGM9 314 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 OR2T29Q8NH02 315 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 LEAP2Q969E1 77 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 IL22RA2Q969J5 263 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 YPEL2Q96QA6 119 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 GPER1Q99527 375 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 BCL7BQ9BQE9 202 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 METTL9Q9H1A3 318 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 KIF25-AS1Q9Y6Z4 181 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 STARD9Q9P2P6 4700 aa3.68□□□□□ -1.82
PTPRM-208ENST00000578600 KIAA1109Q2LD37 5005 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 LOC107986453A0A1B0GWG9 222 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 OR4C46A6NHA9 309 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 A6NIN4 97 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 C15orf65H3BRN8 121 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 PEX7O00628 323 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 ITGB1BP1O14713 200 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 RPP14O95059 124 aaKnown RBP3.67□□□□□ -1.82
PTPRM-208ENST00000578600 IFNA10P01566 189 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 APOA2P02652 100 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 MT-ND4P03905 459 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 CD2P06729 351 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 CD7P09564 240 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 GTF2F2P13984 249 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 CRISP2P16562 243 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 RAB3AP20336 220 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 CBLN1P23435 193 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 NPY1RP25929 384 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 MAGEA2P43356 314 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 RANBP1P43487 201 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 CRISP1P54107 249 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 FGF8P55075 233 aaPredicted RBP3.67□□□□□ -1.82
PTPRM-208ENST00000578600 NDPQ00604 133 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 CDK5R1Q15078 307 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 ZNF79Q15937 498 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 MORN2Q502X0 79 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 CT45A1Q5HYN5 189 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 FAM131AQ6UXB0 335 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 ZNF833PQ6ZTB9 187 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 PDPNQ86YL7 162 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 NECAP1Q8NC96 275 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 OR4A5Q8NH83 315 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 CT45A3Q8NHU0 189 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 FAM210BQ96KR6 192 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 ATP6V1G3Q96LB4 118 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 SPIN2AQ99865 258 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 APOL4Q9BPW4 351 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 SPIN2BQ9BPZ2 258 aa3.67□□□□□ -1.82
PTPRM-208ENST00000578600 MRPL27Q9P0M9 148 aaKnown RBP3.67□□□□□ -1.82
PTPRM-208ENST00000578600 METTL1Q9UBP6 276 aaKnown RBP3.67□□□□□ -1.82
PTPRM-208ENST00000578600 CHTOPQ9Y3Y2 248 aaKnown RBP3.67□□□□□ -1.82
PTPRM-208ENST00000578600 TNCP24821 2201 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 ALMS1Q8TCU4 4167 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.66□□□□□ -1.82
PTPRM-208ENST00000578600 TRAV10A0A0B4J240 114 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 C2orf70A6NJV1 201 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 C16orf90A8MZG2 172 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 ZNF736B4DX44 427 aaPredicted RBP3.66□□□□□ -1.82
PTPRM-208ENST00000578600 MRPS14O60783 128 aaKnown RBP3.66□□□□□ -1.82
PTPRM-208ENST00000578600 FKBP6O75344 327 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 IGHV3-43DP0DP04 118 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 RAB11AP62491 216 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 PPP3R1P63098 170 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 UNC119Q13432 240 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 RAB11BQ15907 218 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 C1orf134Q5TEV5 83 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 ZNF691Q5VV52 312 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 ZNF439Q8NDP4 499 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 OR52N1Q8NH53 320 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 EEF1AKMT3Q96AZ1 226 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 FAM3DQ96BQ1 224 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 PHB2Q99623 299 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 FBXL15Q9H469 300 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 COA4Q9NYJ1 87 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 TVP23BQ9NYZ1 205 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 UFC1Q9Y3C8 167 aa3.66□□□□□ -1.82
PTPRM-208ENST00000578600 IGKV1-9A0A0C4DH69 117 aa3.65□□□□□ -1.83
PTPRM-208ENST00000578600 IGKV1-12A0A0C4DH73 117 aa3.65□□□□□ -1.83
PTPRM-208ENST00000578600 TMEM212A6NML5 194 aa3.65□□□□□ -1.83
PTPRM-208ENST00000578600 A8MWP6 167 aa3.65□□□□□ -1.83
PTPRM-208ENST00000578600 IGKV1D-12P01611 117 aa3.65□□□□□ -1.83
PTPRM-208ENST00000578600 HBZP02008 142 aa3.65□□□□□ -1.83
PTPRM-208ENST00000578600 MRPL3P09001 348 aaKnown RBP3.65□□□□□ -1.83
PTPRM-208ENST00000578600 HIST1H1BP16401 226 aaKnown RBP3.65□□□□□ -1.83
PTPRM-208ENST00000578600 HRH1P35367 487 aa3.65□□□□□ -1.83
PTPRM-208ENST00000578600 CTRLP40313 264 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms