RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 IGKV1OR2-108A0A075B7D4 117 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 IGHV7-81A0A0B4J1V7 117 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 LOC102723971A0A1B0GUV8 181 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 TCRBV4S1A1TA0A5B7 111 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 DEFA5Q01523 94 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 GCSAMLQ5JQS6 135 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 C10orf91Q5T1B1 145 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 TTC9CQ8N5M4 171 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 RNF2Q99496 336 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 SLC35B3Q9H1N7 401 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 TMEM160Q9NX00 188 aa13.39□□□□□ -0.27
SREBF1-218ENST00000578469 CARHSP1Q9Y2V2 147 aaKnown RBP13.39□□□□□ -0.27
SREBF1-218ENST00000578469 AVPP01185 164 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 HSPB1P04792 205 aaKnown RBP13.38□□□□□ -0.27
SREBF1-218ENST00000578469 BCL2P10415 239 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 PSMB3P49720 205 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 CYB5R2Q6BCY4 276 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 SLC35E3Q7Z769 313 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 IQCF2Q8IXL9 164 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 SVBPQ8N300 66 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 C5orf56Q8N8D9 126 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 TMEM116Q8NCL8 245 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 NANPQ8TBE9 248 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 TMEM68Q96MH6 324 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 TRGV9Q99603 122 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 RARRES2Q99969 163 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 MANBALQ9NQG1 85 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 TNFRSF19Q9NS68 423 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 THYN1Q9P016 225 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 VAX2Q9UIW0 290 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 PITPNC1Q9UKF7 332 aa13.38□□□□□ -0.27
SREBF1-218ENST00000578469 C9JQL5 133 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 I3L2K1 104 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 HMGB3O15347 200 aaKnown RBP13.37□□□□□ -0.27
SREBF1-218ENST00000578469 CXorf1O96002 111 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 IGHV3-48P01763 117 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 NDPQ00604 133 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 ICAM4Q14773 271 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 C19orf35Q6ZS72 473 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 OR1L4Q8NGR5 311 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 SGMS2Q8NHU3 365 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 PIFOQ8TCI5 191 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 RXFP4Q8TDU9 374 aa13.37□□□□□ -0.27
SREBF1-218ENST00000578469 FABP1P07148 127 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 STAG3L2P0CL84 134 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 STAG3L3P0CL85 134 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 HIST1H1BP16401 226 aaKnown RBP13.36□□□□□ -0.27
SREBF1-218ENST00000578469 ADCYAP1P18509 176 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 KRTAP24-1Q3LI83 254 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 ASPHD1Q5U4P2 390 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 OR4X1Q8NH49 305 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 GATAD1Q8WUU5 269 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 PFDN5Q99471 154 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 MRPL36Q9P0J6 103 aaKnown RBP13.36□□□□□ -0.27
SREBF1-218ENST00000578469 FUT9Q9Y231 359 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 DMRT1Q9Y5R6 373 aa13.36□□□□□ -0.27
SREBF1-218ENST00000578469 IGKV1D-37A0A075B6S9 117 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 IGHV3-21A0A0B4J1V1 117 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 A6NDX4 124 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 H3BUX3 64 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 M0QZK8 103 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 PLXNB1O43157 2135 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 EIF3GO75821 320 aaKnown RBP eCLIP13.35□□□□□ -0.27
SREBF1-218ENST00000578469 SRP19P09132 144 aaKnown RBP13.35□□□□□ -0.27
SREBF1-218ENST00000578469 EGR2P11161 476 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-218ENST00000578469 GATA2P23769 480 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-218ENST00000578469 TAS2R45P59539 299 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 FAM78BQ5VT40 261 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 UNQ5815/PRO19632Q6UWF5 114 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 C16orf82Q7Z2V1 217 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 TMEM219Q86XT9 240 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 FAM110DQ8TAY7 271 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-218ENST00000578469 HSPB9Q9BQS6 159 aa13.35□□□□□ -0.27
SREBF1-218ENST00000578469 MRPL32Q9BYC8 188 aaKnown RBP13.35□□□□□ -0.27
SREBF1-218ENST00000578469 IGLV11-55A0A075B6I3 123 aa13.34□□□□□ -0.27
SREBF1-218ENST00000578469 K7EIM0 57 aa13.34□□□□□ -0.27
SREBF1-218ENST00000578469 COX7A2P2O60397 106 aa13.34□□□□□ -0.27
SREBF1-218ENST00000578469 SNAPINO95295 136 aa13.34□□□□□ -0.27
SREBF1-218ENST00000578469 SOHLH1Q5JUK2 328 aa13.34□□□□□ -0.27
SREBF1-218ENST00000578469 OR5T1Q8NG75 326 aa13.34□□□□□ -0.27
SREBF1-218ENST00000578469 DNAJC4Q9NNZ3 241 aa13.34□□□□□ -0.27
SREBF1-218ENST00000578469 TECRQ9NZ01 308 aaKnown RBP13.34□□□□□ -0.27
SREBF1-218ENST00000578469 TRAV30A0A087WSZ9 112 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 ATP6V0E1O15342 81 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 NDUFS6O75380 124 aaKnown RBP13.33□□□□□ -0.28
SREBF1-218ENST00000578469 CLN5O75503 358 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 SCGB2A1O75556 95 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 OR5G3P0C626 314 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 SRD5A1P18405 259 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 HNF1AP20823 631 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 NPBWR1P48145 328 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 MFAP4P55083 255 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 ZNF90Q03938 601 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 LY6EQ16553 131 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 TEX29Q8N6K0 151 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 TMPRSS5Q9H3S3 457 aa13.33□□□□□ -0.28
SREBF1-218ENST00000578469 SEPSECSQ9HD40 501 aaKnown RBP13.33□□□□□ -0.28
SREBF1-218ENST00000578469 SOX21Q9Y651 276 aaPredicted RBP13.33□□□□□ -0.28
SREBF1-218ENST00000578469 ELOA3CA0A087WX78 387 aaPredicted RBP13.32□□□□□ -0.28
SREBF1-218ENST00000578469 ARL14EPLP0DKL9 152 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms