RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 LRRC20Q8TCA0 184 aa10.47□□□□□ -0.73
SRSF1-202ENST00000578430 TMED6Q8WW62 240 aa10.47□□□□□ -0.73
SRSF1-202ENST00000578430 EEF1AKMT3Q96AZ1 226 aa10.47□□□□□ -0.73
SRSF1-202ENST00000578430 TRGV9Q99603 122 aa10.47□□□□□ -0.73
SRSF1-202ENST00000578430 GGTLC1Q9BX51 225 aa10.47□□□□□ -0.73
SRSF1-202ENST00000578430 ZFP92A6NM28 416 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 AGPAT2O15120 278 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 MBP02144 154 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 PF4V1P10720 104 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 PSMB8P28062 276 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 RPL29P47914 159 aaKnown RBP10.46□□□□□ -0.73
SRSF1-202ENST00000578430 TPPP2P59282 170 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 RUNX1Q01196 453 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 C15orf32Q32M92 178 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 TMEM95Q3KNT9 176 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 ALKAL2Q6UX46 152 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 RNF152Q8N8N0 203 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 MGST2Q99735 147 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 RSG1Q9BU20 258 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 SLC45A2Q9UMX9 530 aa10.46□□□□□ -0.73
SRSF1-202ENST00000578430 IGKV1OR2-108A0A075B7D4 117 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 IGHV3-21A0A0B4J1V1 117 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 TCRBV4S1A1TA0A5B7 111 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 MFSD2BA6NFX1 497 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 GNG7O60262 68 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 OR10J1P30954 320 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 RAB9AP51151 201 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 AKR1C8PQ5T2L2 129 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 CYP2G1PQ6ZSU1 146 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 ZNF502Q8TBZ5 544 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 RNF141Q8WVD5 230 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 MS4A10Q96PG2 267 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 SH3BGRL3Q9H299 93 aa10.45□□□□□ -0.74
SRSF1-202ENST00000578430 MRPL36Q9P0J6 103 aaKnown RBP10.45□□□□□ -0.74
SRSF1-202ENST00000578430 IGKV1D-37A0A075B6S9 117 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 TSPAN15O95858 294 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 IGHV3-48P01763 117 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 IGLC1P0CG04 106 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 SULT1A2P50226 295 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 PRR20EP86478 221 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 PRR20CP86479 221 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 PRR20DP86480 221 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 PRR20BP86481 221 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 PRR20AP86496 221 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 Q56UQ5 140 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 SPSB3Q6PJ21 355 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 DPPA3Q6W0C5 159 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 OR4F5Q8NH21 305 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 SPATA3Q8NHX4 192 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 COL6A5A8TX70 2615 aa10.44□□□□□ -0.74
SRSF1-202ENST00000578430 CUBNO60494 3623 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 RAB14P61106 215 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 YPEL3P61236 119 aaPredicted RBP10.43□□□□□ -0.74
SRSF1-202ENST00000578430 B2MP61769 119 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 ACOT6Q3I5F7 207 aaPredicted RBP10.43□□□□□ -0.74
SRSF1-202ENST00000578430 FFAR4Q5NUL3 377 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 PXDC1Q5TGL8 231 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 TMEM182Q6ZP80 229 aaPredicted RBP10.43□□□□□ -0.74
SRSF1-202ENST00000578430 ZNF329Q86UD4 541 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 BPIFCQ8NFQ6 507 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 MYOZ3Q8TDC0 251 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 SAT2Q96F10 170 aaPredicted RBP10.43□□□□□ -0.74
SRSF1-202ENST00000578430 C19orf24Q9BVV8 132 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 KLK15Q9H2R5 256 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 SLC39A9Q9NUM3 307 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 PXMP4Q9Y6I8 212 aa10.43□□□□□ -0.74
SRSF1-202ENST00000578430 A0A1B0GUS0 222 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 F8W735 103 aaPredicted RBP10.42□□□□□ -0.74
SRSF1-202ENST00000578430 NUPL2O15504 423 aaKnown RBP10.42□□□□□ -0.74
SRSF1-202ENST00000578430 IGKV1-17P01599 117 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 M6PRP20645 277 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 TMEM41BQ5BJD5 291 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 ZNF343Q6P1L6 599 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 Q6ZRG5 221 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 KLHDC1Q8N7A1 406 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 STPG3Q8N7X2 389 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 OR4X2Q8NGF9 303 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 LINC01006Q8NI28 216 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 WFDC12Q8WWY7 111 aa10.42□□□□□ -0.74
SRSF1-202ENST00000578430 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.41□□□□□ -0.74
SRSF1-202ENST00000578430 TOMM40O96008 361 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 CLEC3BP05452 202 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 LINC00869P0C866 280 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 RD3LP0DJH9 198 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 PLP1P60201 277 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 BLOC1S1P78537 153 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 ZNF616Q08AN1 781 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 MIC13Q5XKP0 118 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 OR1L4Q8NGR5 311 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 WIPF2Q8TF74 440 aaPredicted RBP10.41□□□□□ -0.74
SRSF1-202ENST00000578430 Q8WTZ3 238 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 UBE2E2Q96LR5 201 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 CCDC140Q96MF4 163 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 RNF2Q99496 336 aa10.41□□□□□ -0.74
SRSF1-202ENST00000578430 ELOA3CA0A087WX78 387 aaPredicted RBP10.4□□□□□ -0.74
SRSF1-202ENST00000578430 CLPSL1A2RUU4 121 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 OR2T8A6NH00 312 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 TGOLN2O43493 480 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 CTSGP08311 255 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 ELLP55199 621 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms