RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 SCAF4O95104 1147 aaKnown RBP17.35■□□□□ 0.37
LIMD2-204ENST00000578297 CD7P09564 240 aa17.35■□□□□ 0.37
LIMD2-204ENST00000578297 IGLC1P0CG04 106 aa17.35■□□□□ 0.37
LIMD2-204ENST00000578297 GPX4P36969 197 aaPredicted RBP17.35■□□□□ 0.37
LIMD2-204ENST00000578297 RAB11AP62491 216 aa17.35■□□□□ 0.37
LIMD2-204ENST00000578297 RPP30P78346 268 aaKnown RBP17.35■□□□□ 0.37
LIMD2-204ENST00000578297 TIGITQ495A1 244 aa17.35■□□□□ 0.37
LIMD2-204ENST00000578297 LAMTOR1Q6IAA8 161 aa17.35■□□□□ 0.37
LIMD2-204ENST00000578297 SLC16A13Q7RTY0 426 aa17.35■□□□□ 0.37
LIMD2-204ENST00000578297 ZNF431Q8TF32 576 aaPredicted RBP17.35■□□□□ 0.37
LIMD2-204ENST00000578297 WRBO00258 174 aa17.34■□□□□ 0.37
LIMD2-204ENST00000578297 CHEK1O14757 476 aa17.34■□□□□ 0.37
LIMD2-204ENST00000578297 TSPAN4O14817 238 aa17.34■□□□□ 0.37
LIMD2-204ENST00000578297 OR10J1P30954 320 aa17.34■□□□□ 0.37
LIMD2-204ENST00000578297 NPIPB3Q92617 1050 aa17.34■□□□□ 0.37
LIMD2-204ENST00000578297 RHPN1-AS1Q9BWJ2 59 aa17.34■□□□□ 0.37
LIMD2-204ENST00000578297 NKX2-1P43699 371 aaPredicted RBP17.33■□□□□ 0.36
LIMD2-204ENST00000578297 YPEL3P61236 119 aaPredicted RBP17.33■□□□□ 0.36
LIMD2-204ENST00000578297 IAH1Q2TAA2 248 aaPredicted RBP17.33■□□□□ 0.36
LIMD2-204ENST00000578297 SBSPONQ8IVN8 264 aa17.33■□□□□ 0.36
LIMD2-204ENST00000578297 ACY3Q96HD9 319 aa17.33■□□□□ 0.36
LIMD2-204ENST00000578297 ASCL2Q99929 193 aa17.33■□□□□ 0.36
LIMD2-204ENST00000578297 SPAG8Q99932 426 aaPredicted RBP17.33■□□□□ 0.36
LIMD2-204ENST00000578297 SEC22CQ9BRL7 303 aa17.33■□□□□ 0.36
LIMD2-204ENST00000578297 POLR2GP62487 172 aaKnown RBP eCLIP17.32■□□□□ 0.36
LIMD2-204ENST00000578297 ENKURQ8TC29 256 aa17.32■□□□□ 0.36
LIMD2-204ENST00000578297 RNF2Q99496 336 aa17.32■□□□□ 0.36
LIMD2-204ENST00000578297 IGHV3-49A0A0A0MS15 119 aa17.31■□□□□ 0.36
LIMD2-204ENST00000578297 BMI1P35226 326 aa17.31■□□□□ 0.36
LIMD2-204ENST00000578297 GAMTQ14353 236 aa17.31■□□□□ 0.36
LIMD2-204ENST00000578297 ZBTB8BQ8NAP8 495 aaPredicted RBP17.31■□□□□ 0.36
LIMD2-204ENST00000578297 Q8WTZ3 238 aa17.31■□□□□ 0.36
LIMD2-204ENST00000578297 TUBA4BQ9H853 241 aa17.31■□□□□ 0.36
LIMD2-204ENST00000578297 OR11H12B2RN74 326 aa17.3■□□□□ 0.36
LIMD2-204ENST00000578297 IL5P05113 134 aa17.3■□□□□ 0.36
LIMD2-204ENST00000578297 NPPCP23582 126 aa17.3■□□□□ 0.36
LIMD2-204ENST00000578297 SPANXN5Q5MJ07 72 aa17.3■□□□□ 0.36
LIMD2-204ENST00000578297 C12orf45Q8N5I9 185 aaPredicted RBP17.3■□□□□ 0.36
LIMD2-204ENST00000578297 SLC35E1Q96K37 410 aa17.3■□□□□ 0.36
LIMD2-204ENST00000578297 VSIRQ9H7M9 311 aa17.3■□□□□ 0.36
LIMD2-204ENST00000578297 PAIP2BQ9ULR5 123 aaKnown RBP17.3■□□□□ 0.36
LIMD2-204ENST00000578297 CD5P06127 495 aa17.29■□□□□ 0.36
LIMD2-204ENST00000578297 DEFB125Q8N687 156 aa17.29■□□□□ 0.36
LIMD2-204ENST00000578297 METTL26Q96S19 204 aa17.29■□□□□ 0.36
LIMD2-204ENST00000578297 GSKIPQ9P0R6 139 aa17.29■□□□□ 0.36
LIMD2-204ENST00000578297 STRAPQ9Y3F4 350 aaKnown RBP17.29■□□□□ 0.36
LIMD2-204ENST00000578297 IGHV3OR16-13A0A075B7E8 117 aa17.28■□□□□ 0.36
LIMD2-204ENST00000578297 IGHV3-74A0A0B4J1X5 117 aa17.28■□□□□ 0.36
LIMD2-204ENST00000578297 PRSS46E5RG02 174 aa17.28■□□□□ 0.36
LIMD2-204ENST00000578297 APOHP02749 345 aaPredicted RBP17.28■□□□□ 0.36
LIMD2-204ENST00000578297 CRYBB3P26998 211 aa17.28■□□□□ 0.36
LIMD2-204ENST00000578297 FAM90A2PQ658T7 463 aa17.28■□□□□ 0.36
LIMD2-204ENST00000578297 NRARPQ7Z6K4 114 aa17.28■□□□□ 0.36
LIMD2-204ENST00000578297 ST8SIA2Q92186 375 aa17.28■□□□□ 0.36
LIMD2-204ENST00000578297 SMIM8Q96KF7 97 aa17.28■□□□□ 0.36
LIMD2-204ENST00000578297 PSENENQ9NZ42 101 aa17.28■□□□□ 0.36
LIMD2-204ENST00000578297 H3BP45 60 aa17.27■□□□□ 0.36
LIMD2-204ENST00000578297 CCSO14618 274 aa17.27■□□□□ 0.36
LIMD2-204ENST00000578297 SSSCA1O60232 199 aa17.27■□□□□ 0.36
LIMD2-204ENST00000578297 TOMM40O96008 361 aa17.27■□□□□ 0.36
LIMD2-204ENST00000578297 RD3LP0DJH9 198 aa17.27■□□□□ 0.36
LIMD2-204ENST00000578297 DEFA1P59665 94 aa17.27■□□□□ 0.36
LIMD2-204ENST00000578297 DEFA3P59666 94 aa17.27■□□□□ 0.36
LIMD2-204ENST00000578297 WFDC10AQ9H1F0 79 aa17.27■□□□□ 0.36
LIMD2-204ENST00000578297 TMEM231Q9H6L2 316 aa17.27■□□□□ 0.36
LIMD2-204ENST00000578297 A0A1W2PS18 150 aa17.26■□□□□ 0.35
LIMD2-204ENST00000578297 OR4C46A6NHA9 309 aa17.26■□□□□ 0.35
LIMD2-204ENST00000578297 SCGB1D2O95969 90 aa17.26■□□□□ 0.35
LIMD2-204ENST00000578297 PAX9P55771 341 aa17.26■□□□□ 0.35
LIMD2-204ENST00000578297 LINC00322Q6ZN03 302 aaPredicted RBP17.26■□□□□ 0.35
LIMD2-204ENST00000578297 LILRB2Q8N423 598 aa17.26■□□□□ 0.35
LIMD2-204ENST00000578297 RAB40CQ96S21 281 aa17.26■□□□□ 0.35
LIMD2-204ENST00000578297 HUWE1Q7Z6Z7 4374 aaKnown RBP17.26■□□□□ 0.35
LIMD2-204ENST00000578297 IGKV1D-37A0A075B6S9 117 aa17.25■□□□□ 0.35
LIMD2-204ENST00000578297 ZFP92A6NM28 416 aa17.25■□□□□ 0.35
LIMD2-204ENST00000578297 MBPP02686 304 aaPredicted RBP17.25■□□□□ 0.35
LIMD2-204ENST00000578297 TAS2R30P59541 319 aa17.25■□□□□ 0.35
LIMD2-204ENST00000578297 TCF24Q7RTU0 167 aa17.25■□□□□ 0.35
LIMD2-204ENST00000578297 NARS2Q96I59 477 aaKnown RBP17.25■□□□□ 0.35
LIMD2-204ENST00000578297 SRD5A3Q9H8P0 318 aa17.25■□□□□ 0.35
LIMD2-204ENST00000578297 U3KQK5 164 aa17.25■□□□□ 0.35
LIMD2-204ENST00000578297 IGHV3-66A0A0C4DH42 116 aa17.24■□□□□ 0.35
LIMD2-204ENST00000578297 C5orf51A6NDU8 294 aa17.24■□□□□ 0.35
LIMD2-204ENST00000578297 FAM25EA8MYX2 175 aa17.24■□□□□ 0.35
LIMD2-204ENST00000578297 IL4P05112 153 aa17.24■□□□□ 0.35
LIMD2-204ENST00000578297 PSG1P11464 419 aa17.24■□□□□ 0.35
LIMD2-204ENST00000578297 TM2D3Q9BRN9 247 aa17.24■□□□□ 0.35
LIMD2-204ENST00000578297 GPN1Q9HCN4 374 aaPredicted RBP17.24■□□□□ 0.35
LIMD2-204ENST00000578297 RCL1Q9Y2P8 373 aaKnown RBP17.24■□□□□ 0.35
LIMD2-204ENST00000578297 U3KQE9 123 aa17.24■□□□□ 0.35
LIMD2-204ENST00000578297 DFFBO76075 338 aa17.23■□□□□ 0.35
LIMD2-204ENST00000578297 HNRNPCP07910 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
LIMD2-204ENST00000578297 PAFAH1B2P68402 229 aa17.23■□□□□ 0.35
LIMD2-204ENST00000578297 USF2Q15853 346 aaPredicted RBP17.23■□□□□ 0.35
LIMD2-204ENST00000578297 HAGHQ16775 308 aa17.23■□□□□ 0.35
LIMD2-204ENST00000578297 THAP8Q8NA92 274 aa17.23■□□□□ 0.35
LIMD2-204ENST00000578297 OR51G1Q8NGK1 321 aa17.23■□□□□ 0.35
LIMD2-204ENST00000578297 C2orf50Q96LR7 162 aa17.23■□□□□ 0.35
LIMD2-204ENST00000578297 TRGV9Q99603 122 aa17.23■□□□□ 0.35
LIMD2-204ENST00000578297 FAM110AQ9BQ89 295 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms