RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 TNFRSF1AP19438 455 aa11.15□□□□□ -0.63
NDEL1-204ENST00000578172 CNTFRP26992 372 aa11.15□□□□□ -0.63
NDEL1-204ENST00000578172 PLA2G2CQ5R387 149 aa11.15□□□□□ -0.63
NDEL1-204ENST00000578172 LAMTOR2Q9Y2Q5 125 aa11.15□□□□□ -0.63
NDEL1-204ENST00000578172 FAM215AQ9Y5M1 114 aa11.15□□□□□ -0.63
NDEL1-204ENST00000578172 IGKV1OR2-108A0A075B7D4 117 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 TRAV8-1A0A0A6YYK1 113 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 A0A1W2PN81 502 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 TIMM23BQ5SRD1 257 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 TCF24Q7RTU0 167 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 FAM168AQ92567 244 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 RAB37Q96AX2 223 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 IGHV3-23P01764 117 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 LRRC10Q5BKY1 277 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 C1orf194Q5T5A4 169 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 MUC15Q8N387 334 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 ASH1LQ9NR48 2969 aaKnown RBP11.14□□□□□ -0.63
NDEL1-204ENST00000578172 SPENQ96T58 3664 aaKnown RBP11.14□□□□□ -0.63
NDEL1-204ENST00000578172 APCSP02743 223 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 ARL3P36405 182 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 BEND2Q8NDZ0 799 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 RNF2Q99496 336 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 AMMECR1Q9Y4X0 333 aaPredicted RBP11.14□□□□□ -0.63
NDEL1-204ENST00000578172 ACACBO00763 2458 aa11.14□□□□□ -0.63
NDEL1-204ENST00000578172 LDLRAD2Q5SZI1 272 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 OR1L8Q8NGR8 309 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 GAFA1Q96PS6 74 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 ALKBH7Q9BT30 221 aaPredicted RBP11.13□□□□□ -0.63
NDEL1-204ENST00000578172 ASCL3Q9NQ33 180 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
NDEL1-204ENST00000578172 MKRN2OSH3BPM6 223 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 MPDU1O75352 247 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 VENTXO95231 258 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 IGHG3P01860 377 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 RITA1Q96K30 269 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 GNB4Q9HAV0 340 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 NRN1Q9NPD7 142 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 CORTO00230 105 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 FAM87AP0C7U9 286 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 IL36BQ9NZH7 164 aa11.13□□□□□ -0.63
NDEL1-204ENST00000578172 GGTLC3B5MD39 225 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 UPK2O00526 184 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 C8orf88P0DMB2 117 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 KLF17Q5JT82 389 aaPredicted RBP11.12□□□□□ -0.63
NDEL1-204ENST00000578172 CORO2AQ92828 525 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 FBXL15Q9H469 300 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 ZNF292O60281 2723 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 PTPN13Q12923 2485 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 SH2D7A6NKC9 451 aaPredicted RBP11.12□□□□□ -0.63
NDEL1-204ENST00000578172 VSTM5A8MXK1 200 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 J3QW42 95 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 PRR7Q8TB68 274 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 PGLYRP4Q96LB8 373 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 GAL3ST2Q9H3Q3 398 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 TMEM167BQ9NRX6 74 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 SVEP1Q4LDE5 3571 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 NUDT3O95989 172 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 MBNL2Q5VZF2 373 aaKnown RBP11.12□□□□□ -0.63
NDEL1-204ENST00000578172 RAB9BQ9NP90 201 aa11.12□□□□□ -0.63
NDEL1-204ENST00000578172 COMPP49747 757 aaPredicted RBP11.11□□□□□ -0.63
NDEL1-204ENST00000578172 Q5PR19 223 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 FAM222BQ8WU58 562 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 RCHY1Q96PM5 261 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 OR8B2Q96RD0 313 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 NAA38Q9BRA0 125 aaKnown RBP11.11□□□□□ -0.63
NDEL1-204ENST00000578172 SLC25A33Q9BSK2 321 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 ZNF430Q9H8G1 570 aaPredicted RBP11.11□□□□□ -0.63
NDEL1-204ENST00000578172 TLN2Q9Y4G6 2542 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 IGHV3OR16-13A0A075B7E8 117 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 IGHV3-74A0A0B4J1X5 117 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 AREGP15514 252 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 MAS1LP35410 378 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 TMEM200BQ69YZ2 307 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 NEU1Q99519 415 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 TNFRSF19Q9NS68 423 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 ISLRO14498 428 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 NHLH1Q02575 133 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 Q6ZWC4 215 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 GTF2H5Q6ZYL4 71 aa11.11□□□□□ -0.63
NDEL1-204ENST00000578172 P0C879 139 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 ZNF138P52744 262 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 ARF6P62330 175 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 MAJINQ3KP22 176 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 PRNTQ86SH4 94 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 MRPL36Q9P0J6 103 aaKnown RBP11.1□□□□□ -0.63
NDEL1-204ENST00000578172 INSIG2Q9Y5U4 225 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 NCBP2LA6PVI3 153 aaKnown RBP11.1□□□□□ -0.63
NDEL1-204ENST00000578172 OR5AL1P0C617 328 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 SCGB2A2Q13296 93 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 WDR73Q6P4I2 378 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 S100A7AQ86SG5 101 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 OR1L4Q8NGR5 311 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 CLEC5AQ9NY25 188 aa11.1□□□□□ -0.63
NDEL1-204ENST00000578172 RPUSD1Q9UJJ7 312 aaKnown RBP11.1□□□□□ -0.63
NDEL1-204ENST00000578172 SORL1Q92673 2214 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 TMEM144Q7Z5S9 345 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms