RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 ZFP69Q49AA0 526 aa8.23□□□□□ -1.09
SMARCE1-214ENST00000578112 PVRIGQ6DKI7 326 aa8.23□□□□□ -1.09
SMARCE1-214ENST00000578112 LINC00299Q6ZSB3 139 aa8.23□□□□□ -1.09
SMARCE1-214ENST00000578112 GVQW1Q8N7I0 195 aa8.23□□□□□ -1.09
SMARCE1-214ENST00000578112 TSPAN14Q8NG11 270 aa8.23□□□□□ -1.09
SMARCE1-214ENST00000578112 OR10W1Q8NGF6 305 aa8.23□□□□□ -1.09
SMARCE1-214ENST00000578112 MITD1Q8WV92 249 aa8.23□□□□□ -1.09
SMARCE1-214ENST00000578112 PACRGQ96M98 296 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-214ENST00000578112 NAGKQ9UJ70 344 aa8.23□□□□□ -1.09
SMARCE1-214ENST00000578112 A0A1W2PS18 150 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 STAG3L2P0CL84 134 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 RPA2P15927 270 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 ZNF846Q147U1 533 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 OR51H1Q8NH63 302 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 RNF2Q99496 336 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 APLNQ9ULZ1 77 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 H2AFB1P0C5Y9 115 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 NPBWR1P48145 328 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 UCP3P55916 312 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 FXYD4P59646 89 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 ERHP84090 104 aaKnown RBP8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 PRCDQ00LT1 54 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 ZNF414Q96IQ9 312 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 RNF126Q9BV68 326 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 Q9H521 79 aa8.22□□□□□ -1.09
SMARCE1-214ENST00000578112 TRAV10A0A0B4J240 114 aa8.21□□□□□ -1.09
SMARCE1-214ENST00000578112 RGS5O15539 181 aa8.21□□□□□ -1.09
SMARCE1-214ENST00000578112 ATG12O94817 140 aa8.21□□□□□ -1.09
SMARCE1-214ENST00000578112 S100A16Q96FQ6 103 aaKnown RBP8.21□□□□□ -1.09
SMARCE1-214ENST00000578112 CNBD2Q96M20 576 aa8.21□□□□□ -1.09
SMARCE1-214ENST00000578112 EHFQ9NZC4 300 aa8.21□□□□□ -1.09
SMARCE1-214ENST00000578112 TRAV34A0A0B4J273 112 aa8.21□□□□□ -1.1
SMARCE1-214ENST00000578112 EIF3GO75821 320 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMARCE1-214ENST00000578112 CA1P00915 261 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-214ENST00000578112 PSMB9P28065 219 aa8.21□□□□□ -1.1
SMARCE1-214ENST00000578112 UBE2NLQ5JXB2 153 aa8.21□□□□□ -1.1
SMARCE1-214ENST00000578112 TCF24Q7RTU0 167 aa8.21□□□□□ -1.1
SMARCE1-214ENST00000578112 OR5H2Q8NGV7 314 aa8.21□□□□□ -1.1
SMARCE1-214ENST00000578112 ZNF705EA8MWA4 302 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 GNG7O60262 68 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 SDC2P34741 201 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 NANOS2P60321 138 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 HSPE1P61604 102 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 OR6F1Q8NGZ6 308 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 SFT2D1Q8WV19 159 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 ZNF2Q9BSG1 426 aaPredicted RBP8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 PDCD10Q9BUL8 212 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 IGHV3-35A0A0C4DH35 117 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 ARPC5O15511 151 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 AMBPP02760 352 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 RLN1P04808 185 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 SUB1P53999 127 aaKnown RBP eCLIP8.2□□□□□ -1.18e-6■■■□□ 15.3
SMARCE1-214ENST00000578112 IDNKQ5T6J7 187 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 APRG1Q8IVJ8 170 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 Q8NAQ8 132 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 OR4A16Q8NH70 328 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 SLC25A46Q96AG3 418 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 NARS2Q96I59 477 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 FAM210BQ96KR6 192 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 FXYD6Q9H0Q3 95 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 FBXL17Q9UF56 701 aa8.2□□□□□ -1.1
SMARCE1-214ENST00000578112 DNASE2O00115 360 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 CCSO14618 274 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 MT-CO2P00403 227 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 RND3P61587 244 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 TRPT1Q86TN4 253 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 STHQ8IWL8 128 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 MRGPRFQ96AM1 343 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 GPHA2Q96T91 129 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 COPZ2Q9P299 210 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 TRAV30A0A087WSZ9 112 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 ST8SIA3O43173 380 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 DEDDO75618 318 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 KRASP01116 189 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 NHLH2Q02577 135 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 USF2Q15853 346 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 H2BFWTQ7Z2G1 175 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 UBAC2Q8NBM4 344 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 FCAMRQ8WWV6 532 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 SEC22AQ96IW7 307 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 PRRT1Q99946 306 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 HINT2Q9BX68 163 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 MS4A6AQ9H2W1 248 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 SELENOKQ9Y6D0 94 aa8.19□□□□□ -1.1
SMARCE1-214ENST00000578112 G6PCP35575 357 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 TOMM20LQ6UXN7 152 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 OR2D3Q8NGH3 330 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 STOML3Q8TAV4 291 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 GLMPQ8WWB7 406 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 MISP3Q96FF7 219 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 NUDT11Q96G61 164 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 C1QTNF4Q9BXJ3 329 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 CACFD1Q9UGQ2 172 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 HERC2O95714 4834 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 TEX48A0A1B0GUV7 120 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 S100ZQ8WXG8 99 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 MGAT4CQ9UBM8 478 aa8.18□□□□□ -1.1
SMARCE1-214ENST00000578112 HELTA6NFD8 242 aa8.17□□□□□ -1.1
SMARCE1-214ENST00000578112 K7EQG2 157 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms