RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ETV6P41212 452 aa8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 OR1S2Q8NGQ3 325 aa8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 ZNF486Q96H40 463 aaPredicted RBP8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 NIPSNAP3BQ9BS92 247 aa8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 RFNGQ9Y644 331 aa8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 IGHV3OR16-12A0A075B7B8 117 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 CDK2AP2O75956 126 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 P0C879 139 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 HLA-DRB4P13762 266 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 PGAM2P15259 253 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 RCVRNP35243 200 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 YPEL3P61236 119 aaPredicted RBP8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 RND3P61587 244 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 MLANAQ16655 118 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 SIGLEC15Q6ZMC9 328 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 RNASE11Q8TAA1 199 aaKnown RBP8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 GPX8Q8TED1 209 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 RRNAD1Q96FB5 475 aaKnown RBP8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 YTHDF1Q9BYJ9 559 aaKnown RBP8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 SCPEP1Q9HB40 452 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 DKK2Q9UBU2 259 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 HLA-DRB4X5D2U9 266 aa8.3□□□□□ -1.08
CTDNEP1-212ENST00000576613 SMIM31A0A1B0GVY4 71 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 C16orf90A8MZG2 172 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 IL4P05112 153 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 IGLC1P0CG04 106 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 SLC25A4P12235 298 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 HTN3P15516 51 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 OR10J1P30954 320 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 HTR2BP41595 481 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 NKX2-1P43699 371 aaPredicted RBP8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 RND2P52198 227 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 PIGPP57054 158 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 FAM3BP58499 235 aaPredicted RBP8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 DHODHQ02127 395 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 NEDD8Q15843 81 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 TRIM16LQ309B1 348 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 BSXQ3C1V8 233 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 FAM222AQ5U5X8 452 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 MAPKAPK5-AS1Q8N8E1 139 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 TP53RKQ96S44 253 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 Q9H521 79 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 TMED3Q9Y3Q3 217 aa8.29□□□□□ -1.08
CTDNEP1-212ENST00000576613 C3orf85A0A1B0GTC6 90 aa8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 BUB3O43684 328 aa8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 IGKV3-20P01619 116 aa8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 NUP62P37198 522 aaPredicted RBP8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 SPCS3P61009 180 aa8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 OXA1LQ15070 435 aa8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 USF2Q15853 346 aaPredicted RBP8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 PRSS54Q6PEW0 395 aa8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 RNASEH2CQ8TDP1 164 aaKnown RBP8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 HEYLQ9NQ87 328 aaPredicted RBP8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 PFDN2Q9UHV9 154 aa8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 GOLT1BQ9Y3E0 138 aa8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 NACAE9PAV3 2078 aa8.28□□□□□ -1.08
CTDNEP1-212ENST00000576613 HSPG2P98160 4391 aa8.27□□□□□ -1.08
CTDNEP1-212ENST00000576613 HBE1P02100 147 aa8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 PI3P19957 117 aa8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 RPS19P39019 145 aaKnown RBP8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 ETFRF1Q6IPR1 90 aa8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 TMEM88Q6PEY1 159 aa8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 SNX29P2Q8IUI4 249 aa8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 CCDC71LQ8N9Z2 235 aa8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 C15orf53Q8NAA6 179 aa8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 CLUHP3Q96NS8 147 aa8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 ATG101Q9BSB4 218 aa8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 COPZ2Q9P299 210 aa8.27□□□□□ -1.09
CTDNEP1-212ENST00000576613 LOC102723971A0A1B0GUV8 181 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 M0QYG6 137 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 B3GALNT1O75752 331 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 TOMM40O96008 361 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 APOA1P02647 267 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 RD3LP0DJH9 198 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 TGFBR1P36897 503 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 ID1P41134 155 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 FXYD7P58549 80 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 DAD1P61803 113 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 C2orf83Q53S99 150 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 RNASE10Q5GAN6 216 aaKnown RBP8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 GDF5OSQ5U4N7 250 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 SPATA31B1PQ5VZV4 182 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 FOXI2Q6ZQN5 318 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 FAM219AQ8IW50 185 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 ARRDC1Q8N5I2 433 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 SLC24A4Q8NFF2 622 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 OR52E5Q8NH55 327 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 COQ8AQ8NI60 647 aa8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 SAV1Q9H4B6 383 aaPredicted RBP8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 YTHDF2Q9Y5A9 579 aaKnown RBP8.26□□□□□ -1.09
CTDNEP1-212ENST00000576613 A0A0G2JRQ6 117 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 UCP1P25874 307 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 PSMB3P49720 205 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 TNP2Q05952 138 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 RRN3P1Q2M238 152 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 SP6Q3SY56 376 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 AARDQ4LEZ3 155 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 GSG1LQ6UXU4 331 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 NOXA1Q86UR1 476 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms