RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 LYG2Q86SG7 212 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 SLC35E1Q96K37 410 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 CIB3Q96Q77 187 aaPredicted RBP11.45□□□□□ -0.58
SMG6-220ENST00000576218 RNF2Q99496 336 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 SPATA25Q9BR10 227 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 C20orf85Q9H1P6 137 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 UBQLN2Q9UHD9 624 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 COL7A1Q02388 2944 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 IGHV3-66A0A0C4DH42 116 aa11.44□□□□□ -0.58
SMG6-220ENST00000576218 A0A1W2PS18 150 aa11.44□□□□□ -0.58
SMG6-220ENST00000576218 NPPCP23582 126 aa11.44□□□□□ -0.58
SMG6-220ENST00000576218 BTCP35070 178 aa11.44□□□□□ -0.58
SMG6-220ENST00000576218 ATP5IP56385 69 aaPredicted RBP11.44□□□□□ -0.58
SMG6-220ENST00000576218 HAGHQ16775 308 aa11.44□□□□□ -0.58
SMG6-220ENST00000576218 PRSS54Q6PEW0 395 aa11.44□□□□□ -0.58
SMG6-220ENST00000576218 Q8WTZ3 238 aa11.44□□□□□ -0.58
SMG6-220ENST00000576218 MAGT1Q9H0U3 335 aa11.44□□□□□ -0.58
SMG6-220ENST00000576218 MRPL36Q9P0J6 103 aaKnown RBP11.44□□□□□ -0.58
SMG6-220ENST00000576218 DNASE2O00115 360 aaPredicted RBP11.43□□□□□ -0.58
SMG6-220ENST00000576218 SYNGR2O43760 224 aa11.43□□□□□ -0.58
SMG6-220ENST00000576218 ADAP1O75689 374 aa11.43□□□□□ -0.58
SMG6-220ENST00000576218 SCGB1D2O95969 90 aa11.43□□□□□ -0.58
SMG6-220ENST00000576218 CD5P06127 495 aa11.43□□□□□ -0.58
SMG6-220ENST00000576218 MZT2BQ6NZ67 158 aa11.43□□□□□ -0.58
SMG6-220ENST00000576218 TCF24Q7RTU0 167 aa11.43□□□□□ -0.58
SMG6-220ENST00000576218 GBGT1Q8N5D6 347 aa11.43□□□□□ -0.58
SMG6-220ENST00000576218 NPIPB3Q92617 1050 aa11.43□□□□□ -0.58
SMG6-220ENST00000576218 GRAMD2BQ96HH9 432 aa11.43□□□□□ -0.58
SMG6-220ENST00000576218 WDR12Q9GZL7 423 aaKnown RBP11.43□□□□□ -0.58
SMG6-220ENST00000576218 ZFAND3Q9H8U3 227 aa11.43□□□□□ -0.58
SMG6-220ENST00000576218 TRAV6A0A075B6T7 132 aa11.42□□□□□ -0.58
SMG6-220ENST00000576218 ZFP92A6NM28 416 aa11.42□□□□□ -0.58
SMG6-220ENST00000576218 PITX3O75364 302 aa11.42□□□□□ -0.58
SMG6-220ENST00000576218 LINC00299Q6ZSB3 139 aa11.42□□□□□ -0.58
SMG6-220ENST00000576218 ST8SIA2Q92186 375 aa11.42□□□□□ -0.58
SMG6-220ENST00000576218 TM2D3Q9BRN9 247 aa11.42□□□□□ -0.58
SMG6-220ENST00000576218 NUDT15Q9NV35 164 aa11.42□□□□□ -0.58
SMG6-220ENST00000576218 PTTG2Q9NZH5 202 aa11.42□□□□□ -0.58
SMG6-220ENST00000576218 LOC102724200A0A096LPH7 203 aaPredicted RBP11.41□□□□□ -0.58
SMG6-220ENST00000576218 FAM240BA0A1B0GVZ2 78 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 PLA2G10O15496 165 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 IGKV1-17P01599 117 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 TCRBP04435 133 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 IL4P05112 153 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 FABP1P07148 127 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 IGLC1P0CG04 106 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 RD3LP0DJH9 198 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 EIF2B2P49770 351 aaKnown RBP11.41□□□□□ -0.58
SMG6-220ENST00000576218 SPANXN5Q5MJ07 72 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 WFDC3Q8IUB2 231 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 TMEM170AQ8WVE7 144 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 GGTLC1Q9BX51 225 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 RABAC1Q9UI14 185 aa11.41□□□□□ -0.58
SMG6-220ENST00000576218 RBMY1BA6NDE4 496 aaKnown RBP11.4□□□□□ -0.58
SMG6-220ENST00000576218 RBMY1EA6NEQ0 496 aaKnown RBP11.4□□□□□ -0.58
SMG6-220ENST00000576218 A6NHS1 94 aa11.4□□□□□ -0.58
SMG6-220ENST00000576218 H3BP45 60 aa11.4□□□□□ -0.58
SMG6-220ENST00000576218 SSSCA1O60232 199 aa11.4□□□□□ -0.58
SMG6-220ENST00000576218 RBMY1DP0C7P1 496 aaKnown RBP11.4□□□□□ -0.58
SMG6-220ENST00000576218 NKX2-1P43699 371 aaPredicted RBP11.4□□□□□ -0.58
SMG6-220ENST00000576218 CMC4P56277 68 aaPredicted RBP11.4□□□□□ -0.58
SMG6-220ENST00000576218 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.58
SMG6-220ENST00000576218 ZNF846Q147U1 533 aa11.4□□□□□ -0.58
SMG6-220ENST00000576218 PBDC1Q9BVG4 233 aa11.4□□□□□ -0.58
SMG6-220ENST00000576218 GSKIPQ9P0R6 139 aa11.4□□□□□ -0.58
SMG6-220ENST00000576218 STRAPQ9Y3F4 350 aaKnown RBP11.4□□□□□ -0.58
SMG6-220ENST00000576218 FAM25EA8MYX2 175 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 DFFBO76075 338 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 TOMM40O96008 361 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 APOHP02749 345 aaPredicted RBP11.39□□□□□ -0.59
SMG6-220ENST00000576218 HNRNPCP07910 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMG6-220ENST00000576218 GPX4P36969 197 aaPredicted RBP11.39□□□□□ -0.59
SMG6-220ENST00000576218 P2RY1P47900 373 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 IAH1Q2TAA2 248 aaPredicted RBP11.39□□□□□ -0.59
SMG6-220ENST00000576218 STXBP6Q8NFX7 210 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 ENKURQ8TC29 256 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 ZNF414Q96IQ9 312 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 VSIRQ9H7M9 311 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 RETNQ9HD89 108 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 BATF3Q9NR55 127 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 PFDN2Q9UHV9 154 aa11.39□□□□□ -0.59
SMG6-220ENST00000576218 SMCO3A2RU48 225 aa11.38□□□□□ -0.59
SMG6-220ENST00000576218 H2AFB2P0C5Z0 115 aa11.38□□□□□ -0.59
SMG6-220ENST00000576218 APOC4P55056 127 aa11.38□□□□□ -0.59
SMG6-220ENST00000576218 POLR2GP62487 172 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMG6-220ENST00000576218 AKR1C1Q04828 323 aa11.38□□□□□ -0.59
SMG6-220ENST00000576218 GAMTQ14353 236 aa11.38□□□□□ -0.59
SMG6-220ENST00000576218 MITD1Q8WV92 249 aa11.38□□□□□ -0.59
SMG6-220ENST00000576218 FAM110AQ9BQ89 295 aa11.38□□□□□ -0.59
SMG6-220ENST00000576218 PSENENQ9NZ42 101 aa11.38□□□□□ -0.59
SMG6-220ENST00000576218 C5orf51A6NDU8 294 aa11.37□□□□□ -0.59
SMG6-220ENST00000576218 MPTX1A8MV57 137 aa11.37□□□□□ -0.59
SMG6-220ENST00000576218 CRYBB3P26998 211 aa11.37□□□□□ -0.59
SMG6-220ENST00000576218 NUP62P37198 522 aaPredicted RBP11.37□□□□□ -0.59
SMG6-220ENST00000576218 ODF3L2Q3SX64 289 aa11.37□□□□□ -0.59
SMG6-220ENST00000576218 OR51G1Q8NGK1 321 aa11.37□□□□□ -0.59
SMG6-220ENST00000576218 PPP1R14BQ96C90 147 aa11.37□□□□□ -0.59
SMG6-220ENST00000576218 SEC22CQ9BRL7 303 aa11.37□□□□□ -0.59
SMG6-220ENST00000576218 MS4A6AQ9H2W1 248 aa11.37□□□□□ -0.59
SMG6-220ENST00000576218 HELTA6NFD8 242 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms