RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 REG1AP05451 166 aa11.85□□□□□ -0.51
SCARF1-209ENST00000576012 SAA2P0DJI9 122 aaPredicted RBP11.85□□□□□ -0.51
SCARF1-209ENST00000576012 SMIM21Q3B7S5 101 aa11.85□□□□□ -0.51
SCARF1-209ENST00000576012 C8orf88P0DMB2 117 aa11.85□□□□□ -0.51
SCARF1-209ENST00000576012 TM4SF20Q53R12 229 aa11.85□□□□□ -0.51
SCARF1-209ENST00000576012 ATP1A1-AS1Q5TC04 95 aa11.85□□□□□ -0.51
SCARF1-209ENST00000576012 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
SCARF1-209ENST00000576012 IFI27L2Q9H2X8 130 aa11.85□□□□□ -0.51
SCARF1-209ENST00000576012 SPENQ96T58 3664 aaKnown RBP11.85□□□□□ -0.51
SCARF1-209ENST00000576012 MEOX1P50221 254 aa11.85□□□□□ -0.51
SCARF1-209ENST00000576012 TAS2R45P59539 299 aa11.85□□□□□ -0.51
SCARF1-209ENST00000576012 C10orf55Q5SWW7 151 aa11.85□□□□□ -0.51
SCARF1-209ENST00000576012 Q71RC1 249 aaPredicted RBP11.85□□□□□ -0.51
SCARF1-209ENST00000576012 SYS1-DBNDD2H3BUS1 97 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 SLC25A5P05141 298 aaKnown RBP11.84□□□□□ -0.51
SCARF1-209ENST00000576012 LRRC10Q5BKY1 277 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 OR4S2Q8NH73 311 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 IGF2BP2-AS1Q96M15 143 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 IDI2-AS1Q9NZ38 188 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 IGHV1-24A0A0C4DH33 117 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 COX7A2P2O60397 106 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 IGHV1-2P23083 117 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 ZFHX2Q9C0A1 2572 aaPredicted RBP11.84□□□□□ -0.51
SCARF1-209ENST00000576012 A0A1W2PRE2 83 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 FBLL1A6NHQ2 334 aaKnown RBP11.84□□□□□ -0.51
SCARF1-209ENST00000576012 SRRM4A7MD48 611 aaKnown RBP11.84□□□□□ -0.51
SCARF1-209ENST00000576012 CT45A1Q5HYN5 189 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 LINC00322Q6ZN03 302 aaPredicted RBP11.84□□□□□ -0.51
SCARF1-209ENST00000576012 CT45A3Q8NHU0 189 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 SLC25A33Q9BSK2 321 aa11.84□□□□□ -0.51
SCARF1-209ENST00000576012 TRAV8-1A0A0A6YYK1 113 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 MMP23AO75900 390 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 ADH4P08319 380 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 PNKDQ8N490 385 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 OR2V2Q96R30 315 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 PAXXQ9BUH6 204 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 LY96Q9Y6Y9 160 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 SPTA1P02549 2419 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 IGKV1D-17A0A075B6S4 117 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 SPRY3O43610 288 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 MOSP00540 346 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 FLYWCH2Q96CP2 140 aaKnown RBP11.83□□□□□ -0.52
SCARF1-209ENST00000576012 KALRNO60229 2985 aa11.83□□□□□ -0.52
SCARF1-209ENST00000576012 A0A1W2PRD5 423 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 A0A1W2PRF3 423 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 A0A1W2PRM7 423 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 NPIPB3Q92617 1050 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 CXXC4Q9H2H0 198 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 CHODLQ9H9P2 273 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 MRPL27Q9P0M9 148 aaKnown RBP11.82□□□□□ -0.52
SCARF1-209ENST00000576012 ZNF835Q9Y2P0 537 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 PGPA6NDG6 321 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 GAGE10A6NGK3 116 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 PEX7O00628 323 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 TMPRSS3P57727 454 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 C6orf15Q6UXA7 325 aaPredicted RBP11.82□□□□□ -0.52
SCARF1-209ENST00000576012 CSMD1Q96PZ7 3565 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 LOC389332A0A1B0GUA5 103 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 C7orf71A4D174 169 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 CHEK1O14757 476 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 RNFT1Q5M7Z0 435 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 MOGAT3Q86VF5 341 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 AP1S3Q96PC3 154 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 SLC25A2Q9BXI2 301 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 CALYQ9NYX4 217 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 PILRBQ9UKJ0 227 aa11.82□□□□□ -0.52
SCARF1-209ENST00000576012 C19orf67A6NJJ6 358 aa11.81□□□□□ -0.52
SCARF1-209ENST00000576012 IQCF6A8MYZ5 107 aa11.81□□□□□ -0.52
SCARF1-209ENST00000576012 LAMTOR5O43504 91 aa11.81□□□□□ -0.52
SCARF1-209ENST00000576012 TMEM177Q53S58 311 aa11.81□□□□□ -0.52
SCARF1-209ENST00000576012 PEAR1Q5VY43 1037 aaPredicted RBP11.81□□□□□ -0.52
SCARF1-209ENST00000576012 WFDC3Q8IUB2 231 aa11.81□□□□□ -0.52
SCARF1-209ENST00000576012 E7EUB6 86 aa11.81□□□□□ -0.52
SCARF1-209ENST00000576012 PMS2CLQ68D20 193 aa11.81□□□□□ -0.52
SCARF1-209ENST00000576012 BHLHA15Q7RTS1 189 aaPredicted RBP11.81□□□□□ -0.52
SCARF1-209ENST00000576012 RBMXL3Q8N7X1 1067 aaKnown RBP11.81□□□□□ -0.52
SCARF1-209ENST00000576012 OR1B1Q8NGR6 318 aa11.81□□□□□ -0.52
SCARF1-209ENST00000576012 TMUB1Q9BVT8 246 aa11.81□□□□□ -0.52
SCARF1-209ENST00000576012 CSTL1Q9H114 145 aa11.81□□□□□ -0.52
SCARF1-209ENST00000576012 FAM231BA6NCW3 169 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 H3BUT2 72 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 ARF6P62330 175 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 NHLH1Q02575 133 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 PRB3Q04118 309 aaPredicted RBP11.8□□□□□ -0.52
SCARF1-209ENST00000576012 COX19Q49B96 90 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 WDR31Q8NA23 367 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 OR8A1Q8NGG7 326 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 MBD6Q96DN6 1003 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 GRAMD2BQ96HH9 432 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 ZNF430Q9H8G1 570 aaPredicted RBP11.8□□□□□ -0.52
SCARF1-209ENST00000576012 TECTAO75443 2155 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 PRSS57Q6UWY2 283 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 TMEM191AQ9H0A3 160 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 C21orf140B9A014 251 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 K7ERU9 68 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 LOXL3P58215 753 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 C10orf113Q5VZT2 155 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 DEFB125Q8N687 156 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 CORO2AQ92828 525 aa11.8□□□□□ -0.52
SCARF1-209ENST00000576012 SPRR3Q9UBC9 169 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms