RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 TIGITQ495A1 244 aa7.05□□□□□ -1.28
CALCOCO2-227ENST00000575560 FAM222AQ5U5X8 452 aa7.05□□□□□ -1.28
CALCOCO2-227ENST00000575560 S100A16Q96FQ6 103 aaKnown RBP7.05□□□□□ -1.28
CALCOCO2-227ENST00000575560 CNBD2Q96M20 576 aa7.05□□□□□ -1.28
CALCOCO2-227ENST00000575560 NRN1Q9NPD7 142 aa7.05□□□□□ -1.28
CALCOCO2-227ENST00000575560 SCRT2Q9NQ03 307 aa7.05□□□□□ -1.28
CALCOCO2-227ENST00000575560 RFNGQ9Y644 331 aa7.05□□□□□ -1.28
CALCOCO2-227ENST00000575560 HLA-DRB4X5D2U9 266 aa7.05□□□□□ -1.28
CALCOCO2-227ENST00000575560 BUB3O43684 328 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 HNRNPCP07910 306 aaKnown RBP eCLIP7.04□□□□□ -1.283e-6■■■□□ 14.7
CALCOCO2-227ENST00000575560 IGLC1P0CG04 106 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 OPRK1P41145 380 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 ETV6P41212 452 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 NKX2-1P43699 371 aaPredicted RBP7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 HOXA1P49639 335 aaPredicted RBP7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 UCP3P55916 312 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 GABARAPL2P60520 117 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 GDF5OSQ5U4N7 250 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 TMEM88Q6PEY1 159 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 SLC35G3Q8N808 338 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 Q8WTZ3 238 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 CLUHP3Q96NS8 147 aa7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 YTHDF1Q9BYJ9 559 aaKnown RBP7.04□□□□□ -1.28
CALCOCO2-227ENST00000575560 IGHV3OR16-12A0A075B7B8 117 aa7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 NBDYA0A0U1RRE5 68 aa7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 SCGB2A1O75556 95 aa7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 HTN3P15516 51 aa7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 HLA-DMAP28067 261 aa7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 TAS2R20P59543 309 aa7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 YPEL3P61236 119 aaPredicted RBP7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 DHODHQ02127 395 aa7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 USF2Q15853 346 aaPredicted RBP7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 C6orf223Q8N319 242 aa7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 ZNF709Q8N972 641 aa7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 FCGR1BQ92637 280 aa7.03□□□□□ -1.28
CALCOCO2-227ENST00000575560 IGKV3-20P01619 116 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 PRSS3P35030 304 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 FXYD7P58549 80 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 DEFB1P60022 68 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 TSPAN5P62079 268 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 UBE2NLQ5JXB2 153 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 TMEM69Q5SWH9 247 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 PRSS54Q6PEW0 395 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 SIGLEC15Q6ZMC9 328 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 C1orf158Q8N1D5 194 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 C15orf53Q8NAA6 179 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 OR1S2Q8NGQ3 325 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 ZNRF2Q8NHG8 242 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 SAV1Q9H4B6 383 aaPredicted RBP7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 TMED3Q9Y3Q3 217 aa7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 YTHDF2Q9Y5A9 579 aaKnown RBP7.02□□□□□ -1.29
CALCOCO2-227ENST00000575560 LOC100506127A0A0U1RQW1 187 aa7.01□□□□□ -1.29
CALCOCO2-227ENST00000575560 IL4P05112 153 aa7.01□□□□□ -1.29
CALCOCO2-227ENST00000575560 OR10J1P30954 320 aa7.01□□□□□ -1.29
CALCOCO2-227ENST00000575560 HSPA13P48723 471 aa7.01□□□□□ -1.29
CALCOCO2-227ENST00000575560 RND2P52198 227 aa7.01□□□□□ -1.29
CALCOCO2-227ENST00000575560 RND3P61587 244 aa7.01□□□□□ -1.29
CALCOCO2-227ENST00000575560 AARDQ4LEZ3 155 aa7.01□□□□□ -1.29
CALCOCO2-227ENST00000575560 GPX8Q8TED1 209 aa7.01□□□□□ -1.29
CALCOCO2-227ENST00000575560 TP53RKQ96S44 253 aa7.01□□□□□ -1.29
CALCOCO2-227ENST00000575560 PDCD10Q9BUL8 212 aa7.01□□□□□ -1.29
CALCOCO2-227ENST00000575560 A0A0G2JRQ6 117 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 LOC102723971A0A1B0GUV8 181 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 RPS10-NUDT3A0A1W2PQS6 291 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 ANKRD65E5RJM6 399 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 NXPH3O95157 252 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 HBE1P02100 147 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 SLC25A4P12235 298 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 HTR2BP41595 481 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 ALDH3B2P48448 385 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 AKR1C2P52895 323 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 DAD1P61803 113 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 PSG9Q00887 426 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 ZNF79Q15937 498 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 IZUMO2Q6UXV1 221 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 FOXI2Q6ZQN5 318 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 CROCCP3Q8IVE0 287 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 ZNF486Q96H40 463 aaPredicted RBP7□□□□□ -1.29
CALCOCO2-227ENST00000575560 ATG101Q9BSB4 218 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 WDR12Q9GZL7 423 aaKnown RBP7□□□□□ -1.29
CALCOCO2-227ENST00000575560 SLC35B3Q9H1N7 401 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 ENY2Q9NPA8 101 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 KLK11Q9UBX7 282 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 RAB26Q9ULW5 256 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 GOLT1BQ9Y3E0 138 aa7□□□□□ -1.29
CALCOCO2-227ENST00000575560 DMBT1Q9UGM3 2413 aaPredicted RBP6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 C3orf85A0A1B0GTC6 90 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 SOCS3O14543 225 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 GSTZ1O43708 216 aaPredicted RBP6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 ATG12O94817 140 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 TOMM40O96008 361 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 RD3LP0DJH9 198 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 PI3P19957 117 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 PAX9P55771 341 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 PIGPP57054 158 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 SPCS3P61009 180 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 RRN3P1Q2M238 152 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 C2orf83Q53S99 150 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 SPATA31B1PQ5VZV4 182 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 GSG1LQ6UXU4 331 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms