RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 RPP30P78346 268 aaKnown RBP10.21□□□□□ -0.77
CIITA-210ENST00000575513 GUCA2BQ16661 112 aa10.21□□□□□ -0.77
CIITA-210ENST00000575513 PRSS54Q6PEW0 395 aa10.21□□□□□ -0.77
CIITA-210ENST00000575513 BTNL8Q6UX41 500 aa10.21□□□□□ -0.77
CIITA-210ENST00000575513 TOMM20LQ6UXN7 152 aa10.21□□□□□ -0.77
CIITA-210ENST00000575513 SLC16A13Q7RTY0 426 aa10.21□□□□□ -0.77
CIITA-210ENST00000575513 WDR89Q96FK6 387 aaPredicted RBP10.21□□□□□ -0.77
CIITA-210ENST00000575513 NEURL2Q9BR09 285 aa10.21□□□□□ -0.77
CIITA-210ENST00000575513 COL7A1Q02388 2944 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 C7orf66A4D0T2 115 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 CCSO14618 274 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 IGKV1-17P01599 117 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 BMI1P35226 326 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 CD81P60033 236 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 YPEL3P61236 119 aaPredicted RBP10.2□□□□□ -0.78
CIITA-210ENST00000575513 RAB11AP62491 216 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 C11orf87Q6NUJ2 197 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 OR1S2Q8NGQ3 325 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 C2orf50Q96LR7 162 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 SPAG8Q99932 426 aaPredicted RBP10.2□□□□□ -0.78
CIITA-210ENST00000575513 MAGT1Q9H0U3 335 aa10.2□□□□□ -0.78
CIITA-210ENST00000575513 MRPL36Q9P0J6 103 aaKnown RBP10.2□□□□□ -0.78
CIITA-210ENST00000575513 PUS1Q9Y606 427 aaKnown RBP eCLIP10.2□□□□□ -0.78
CIITA-210ENST00000575513 C5orf51A6NDU8 294 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 CHEK1O14757 476 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 IFNA4P05014 189 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 IGLC1P0CG04 106 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 IAPPP10997 89 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 POLR2GP62487 172 aaKnown RBP eCLIP10.19□□□□□ -0.78
CIITA-210ENST00000575513 IL15RAQ13261 267 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 RGS21Q2M5E4 152 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 GSG1LQ6UXU4 331 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 SBSPONQ8IVN8 264 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 RAB40CQ96S21 281 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 RHPN1-AS1Q9BWJ2 59 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 TUBA4BQ9H853 241 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 ZFAND3Q9H8U3 227 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 GSKIPQ9P0R6 139 aa10.19□□□□□ -0.78
CIITA-210ENST00000575513 IGHV3OR16-8A0A075B7F1 116 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 FAM25EA8MYX2 175 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 WRBO00258 174 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 SCAF4O95104 1147 aaKnown RBP10.18□□□□□ -0.78
CIITA-210ENST00000575513 MBPP02686 304 aaPredicted RBP10.18□□□□□ -0.78
CIITA-210ENST00000575513 CD7P09564 240 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 OR10J1P30954 320 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 RND2P52198 227 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 TAS2R30P59541 319 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 Q8WTZ3 238 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 SMIM8Q96KF7 97 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 FAM110AQ9BQ89 295 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 VSIRQ9H7M9 311 aa10.18□□□□□ -0.78
CIITA-210ENST00000575513 A0A1W2PS18 150 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 OR11H12B2RN74 326 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 ZNF207O43670 478 aaKnown RBP10.17□□□□□ -0.78
CIITA-210ENST00000575513 NPPCP23582 126 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 CRYBB3P26998 211 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 OXA1LQ15070 435 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 TIGITQ495A1 244 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 LINC00322Q6ZN03 302 aaPredicted RBP10.17□□□□□ -0.78
CIITA-210ENST00000575513 NPIPB3Q92617 1050 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 METTL26Q96S19 204 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 RNF2Q99496 336 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 ASCL2Q99929 193 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 TMEM231Q9H6L2 316 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 RCL1Q9Y2P8 373 aaKnown RBP10.17□□□□□ -0.78
CIITA-210ENST00000575513 STRAPQ9Y3F4 350 aaKnown RBP10.17□□□□□ -0.78
CIITA-210ENST00000575513 U3KQK5 164 aa10.17□□□□□ -0.78
CIITA-210ENST00000575513 OR4C46A6NHA9 309 aa10.16□□□□□ -0.78
CIITA-210ENST00000575513 SSSCA1O60232 199 aa10.16□□□□□ -0.78
CIITA-210ENST00000575513 TSC22D2O75157 780 aa10.16□□□□□ -0.78
CIITA-210ENST00000575513 SCGB1D2O95969 90 aa10.16□□□□□ -0.78
CIITA-210ENST00000575513 PAX9P55771 341 aa10.16□□□□□ -0.78
CIITA-210ENST00000575513 CMC4P56277 68 aaPredicted RBP10.16□□□□□ -0.78
CIITA-210ENST00000575513 CYCSP99999 105 aaKnown RBP10.16□□□□□ -0.78
CIITA-210ENST00000575513 GAMTQ14353 236 aa10.16□□□□□ -0.78
CIITA-210ENST00000575513 FAM90A2PQ658T7 463 aa10.16□□□□□ -0.78
CIITA-210ENST00000575513 ACY3Q96HD9 319 aa10.16□□□□□ -0.78
CIITA-210ENST00000575513 TM2D3Q9BRN9 247 aa10.16□□□□□ -0.78
CIITA-210ENST00000575513 PSENENQ9NZ42 101 aa10.16□□□□□ -0.78
CIITA-210ENST00000575513 PRSS46E5RG02 174 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 K7EPK0 472 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 GOSR2O14653 212 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 SSNA1O43805 119 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 TOMM40O96008 361 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 RD3LP0DJH9 198 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 PAFAH1B2P68402 229 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 SPANXN5Q5MJ07 72 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 DEFB125Q8N687 156 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 NARS2Q96I59 477 aaKnown RBP10.15□□□□□ -0.78
CIITA-210ENST00000575513 SLC35E1Q96K37 410 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 C11orf1Q9H5F2 150 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 ZMAT4Q9H898 229 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 ALG5Q9Y673 324 aa10.15□□□□□ -0.78
CIITA-210ENST00000575513 HUWE1Q7Z6Z7 4374 aaKnown RBP10.14□□□□□ -0.79
CIITA-210ENST00000575513 TRAV2A0A0B4J234 112 aa10.14□□□□□ -0.79
CIITA-210ENST00000575513 FABP1P07148 127 aa10.14□□□□□ -0.79
CIITA-210ENST00000575513 HAGHQ16775 308 aa10.14□□□□□ -0.79
CIITA-210ENST00000575513 TMEM14EPQ6UXP3 125 aa10.14□□□□□ -0.79
CIITA-210ENST00000575513 ST8SIA2Q92186 375 aa10.14□□□□□ -0.79
CIITA-210ENST00000575513 NMES1Q9C002 83 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms