RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 SVILO95425 2214 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 CACNA1HO95180 2353 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 IGHV3-72A0A0B4J1Y9 119 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 HLA-DQA1P01909 254 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 WIPF2Q8TF74 440 aaPredicted RBP7.17□□□□□ -1.26
NCBP3-204ENST00000574911 PERPQ96FX8 193 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 GRAMD2BQ96HH9 432 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 TRGV9Q99603 122 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 TNFRSF19Q9NS68 423 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 LAMA5O15230 3695 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 SMG1Q96Q15 3661 aaKnown RBP7.17□□□□□ -1.26
NCBP3-204ENST00000574911 BMPR1BO00238 502 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 EREGO14944 169 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 CA1P00915 261 aaPredicted RBP7.17□□□□□ -1.26
NCBP3-204ENST00000574911 GPX1P07203 203 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 RNF224P0DH78 156 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 APOBEC3AP31941 199 aaPredicted RBP7.17□□□□□ -1.26
NCBP3-204ENST00000574911 BRS3P32247 399 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 PAX2Q02962 417 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 TMEM183BQ1AE95 376 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 KIAA1644Q3SXP7 199 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 PRR30Q53SZ7 412 aaPredicted RBP7.17□□□□□ -1.26
NCBP3-204ENST00000574911 HCP5Q6MZN7 132 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 MRPL54Q6P161 138 aaKnown RBP7.17□□□□□ -1.26
NCBP3-204ENST00000574911 STXBP6Q8NFX7 210 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 C7orf69Q9H7B7 122 aa7.17□□□□□ -1.26
NCBP3-204ENST00000574911 IGHV2-26A0A0B4J1V2 119 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 TRAV34A0A0B4J273 112 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 B9A039 149 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 MOSP00540 346 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 IGLV1-47P01700 117 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 CNTFRP26992 372 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 CDKN1AP38936 164 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 RPL27AP46776 148 aaKnown RBP7.16□□□□□ -1.26
NCBP3-204ENST00000574911 COMPP49747 757 aaPredicted RBP7.16□□□□□ -1.26
NCBP3-204ENST00000574911 TBR1Q16650 682 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 RASL11AQ6T310 242 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 TOMM20LQ6UXN7 152 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 NUDT10Q8NFP7 164 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 NUDT11Q96G61 164 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 SAMD10Q9BYL1 202 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 RALYQ9UKM9 306 aaKnown RBP7.16□□□□□ -1.26
NCBP3-204ENST00000574911 DMXL1Q9Y485 3027 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 PLAUP00749 431 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 APCSP02743 223 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 ORM2P19652 201 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 NBL1P41271 181 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 PRRX1P54821 245 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 CASP6P55212 293 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 GNG5P63218 68 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 USF2Q15853 346 aaPredicted RBP7.16□□□□□ -1.26
NCBP3-204ENST00000574911 TNXAQ16473 311 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 ASPHD1Q5U4P2 390 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 CFAP161Q6P656 301 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 ZNF841Q6ZN19 808 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 TMEM116Q8NCL8 245 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 OR1B1Q8NGR6 318 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 KCNS1Q96KK3 526 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 C20orf144Q9BQM9 153 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 SSBP3Q9BWW4 388 aaPredicted RBP7.16□□□□□ -1.26
NCBP3-204ENST00000574911 CBLN4Q9NTU7 201 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 FBXL7Q9UJT9 491 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 EPDR1Q9UM22 224 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 SIGLEC9Q9Y336 463 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 TNCP24821 2201 aa7.16□□□□□ -1.26
NCBP3-204ENST00000574911 A0A1W2PS18 150 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 TDRG1Q3Y452 100 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 C19orf35Q6ZS72 473 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 SIGLECL1Q8N7X8 197 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 Q8N976 141 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 RCHY1Q96PM5 261 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 CHRDL1Q9BU40 450 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 SNHG12Q9BXW3 62 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 ZNF331Q9NQX6 463 aaPredicted RBP7.15□□□□□ -1.26
NCBP3-204ENST00000574911 KLF12Q9Y4X4 402 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 RNF114Q9Y508 228 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 IGHV1-3A0A0C4DH29 117 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 TEX22C9J3V5 150 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 BUB1B-PAK6H3BSN5 160 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 SRIP30626 198 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 DLX1P56177 255 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 PLP1P60201 277 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 NUP35Q8NFH5 326 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 SMIM12Q96EX1 92 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 INSIG2Q9Y5U4 225 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 BOD1L1Q8NFC6 3051 aa7.15□□□□□ -1.26
NCBP3-204ENST00000574911 EP300Q09472 2414 aaPredicted RBP7.15□□□□□ -1.27
NCBP3-204ENST00000574911 PLCE1Q9P212 2302 aa7.15□□□□□ -1.27
NCBP3-204ENST00000574911 PGPA6NDG6 321 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 M0R143 59 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 CORTO00230 105 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 ZNF253O75346 499 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 HYPMO75409 117 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 CD3EP07766 207 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 RAB4AP20338 218 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 NUTF2P61970 127 aaKnown RBP7.14□□□□□ -1.27
NCBP3-204ENST00000574911 GDF5OSQ5U4N7 250 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 C22orf15Q8WYQ4 148 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 TBL2Q9Y4P3 447 aaKnown RBP7.14□□□□□ -1.27
NCBP3-204ENST00000574911 F11RQ9Y624 299 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms