RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 METTL26Q96S19 204 aa8.32□□□□□ -1.08
RPAIN-214ENST00000574003 RBM38Q9H0Z9 239 aaKnown RBP8.32□□□□□ -1.08
RPAIN-214ENST00000574003 KCNIP3Q9Y2W7 256 aa8.32□□□□□ -1.08
RPAIN-214ENST00000574003 KIR2DL5BA0A0G2JN68 375 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 KIR2DL5BA0A0G2JPC4 375 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 CXorf65A6NEN9 183 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 KNCNA6PVL3 124 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 UBE2CO00762 179 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 CRYBB3P26998 211 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 OR10J1P30954 320 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 BMI1P35226 326 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 TNFRSF9Q07011 255 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 SMCO1Q147U7 214 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 KIR2DL5AQ8N109 375 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 KIR2DL5BQ8NHK3 375 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 IL22RA2Q969J5 263 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 CSTL1Q9H114 145 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 TP53TG1Q9Y2A0 90 aa8.31□□□□□ -1.08
RPAIN-214ENST00000574003 EPPK1P58107 5090 aaKnown RBP8.3□□□□□ -1.08
RPAIN-214ENST00000574003 A0A0B4J2A0 478 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 RPS10-NUDT3A0A1W2PQS6 291 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 DEFB4AO15263 64 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 IFNA10P01566 189 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 ZNF688P0C7X2 276 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 IAPPP10997 89 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 CCR6P51684 374 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 PAFAH1B2P68402 229 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 USF2Q15853 346 aaPredicted RBP8.3□□□□□ -1.08
RPAIN-214ENST00000574003 CCDC190Q86UF4 302 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 LGI3Q8N145 548 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 TOMM5Q8N4H5 51 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 OR1S2Q8NGQ3 325 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 RNASEH2CQ8TDP1 164 aaKnown RBP8.3□□□□□ -1.08
RPAIN-214ENST00000574003 SCGB3A2Q96PL1 93 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 HSPB7Q9UBY9 170 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 SHPKQ9UHJ6 478 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 U3KQE9 123 aa8.3□□□□□ -1.08
RPAIN-214ENST00000574003 TRAV30A0A087WSZ9 112 aa8.29□□□□□ -1.08
RPAIN-214ENST00000574003 MPTX1A8MV57 137 aa8.29□□□□□ -1.08
RPAIN-214ENST00000574003 K7EQG2 157 aa8.29□□□□□ -1.08
RPAIN-214ENST00000574003 JTBO76095 146 aa8.29□□□□□ -1.08
RPAIN-214ENST00000574003 CA1P00915 261 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-214ENST00000574003 VAMP1P23763 118 aa8.29□□□□□ -1.08
RPAIN-214ENST00000574003 PPP1R1AQ13522 171 aa8.29□□□□□ -1.08
RPAIN-214ENST00000574003 OR1S1Q8NH92 325 aa8.29□□□□□ -1.08
RPAIN-214ENST00000574003 DTD1Q8TEA8 209 aa8.29□□□□□ -1.08
RPAIN-214ENST00000574003 TMEM231Q9H6L2 316 aa8.29□□□□□ -1.08
RPAIN-214ENST00000574003 LINC00854A0A1B0GVQ3 168 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 A0A1W2PS18 150 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 PITX3O75364 302 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 IFNA4P05014 189 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 IL4P05112 153 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 HNRNPCP07910 306 aaKnown RBP eCLIP8.28□□□□□ -1.08
RPAIN-214ENST00000574003 GIG44P09565 113 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-214ENST00000574003 SLC25A4P12235 298 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 S100A5P33763 92 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 FAUP35544 74 aaKnown RBP8.28□□□□□ -1.08
RPAIN-214ENST00000574003 CMC4P56277 68 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-214ENST00000574003 YPEL3P61236 119 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-214ENST00000574003 BAK1Q16611 211 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 C16orf54Q6UWD8 224 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 OR51G1Q8NGK1 321 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 OR11H2Q8NH07 326 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 DCANP1Q8TF63 244 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 Q8WTZ3 238 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 GLMPQ8WWB7 406 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 RARRES2Q99969 163 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 SRRQ9GZT4 340 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 MAGT1Q9H0U3 335 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 PAIP2BQ9ULR5 123 aaKnown RBP8.28□□□□□ -1.08
RPAIN-214ENST00000574003 BIRC6Q9NR09 4857 aa8.28□□□□□ -1.08
RPAIN-214ENST00000574003 IGKV1D-37A0A075B6S9 117 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 SFT2D2O95562 160 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 TOMM40O96008 361 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 HOXB5P09067 269 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 RD3LP0DJH9 198 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 PSG1P11464 419 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 ANXA3P12429 323 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 C4BPBP20851 252 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 DEFB1P60022 68 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 NANOS2P60321 138 aaKnown RBP8.27□□□□□ -1.09
RPAIN-214ENST00000574003 ZNF90Q03938 601 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 DHRS2Q13268 280 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 OR2F1Q13607 317 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 GAMTQ14353 236 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 TMEM128Q5BJH2 165 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 ACTL10Q5JWF8 245 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 PBDC1Q9BVG4 233 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 FLVCR2Q9UPI3 526 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 U3KQ87 197 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 KMT2AQ03164 3969 aa8.27□□□□□ -1.09
RPAIN-214ENST00000574003 TRAV2A0A0B4J234 112 aa8.26□□□□□ -1.09
RPAIN-214ENST00000574003 SCGB2A1O75556 95 aa8.26□□□□□ -1.09
RPAIN-214ENST00000574003 CD5P06127 495 aa8.26□□□□□ -1.09
RPAIN-214ENST00000574003 AP3S2P59780 193 aa8.26□□□□□ -1.09
RPAIN-214ENST00000574003 SRPXP78539 464 aa8.26□□□□□ -1.09
RPAIN-214ENST00000574003 PSMG4Q5JS54 123 aa8.26□□□□□ -1.09
RPAIN-214ENST00000574003 ETFRF1Q6IPR1 90 aa8.26□□□□□ -1.09
RPAIN-214ENST00000574003 CEMP1Q6PRD7 247 aaPredicted RBP8.26□□□□□ -1.09
RPAIN-214ENST00000574003 TRPT1Q86TN4 253 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms