RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 CCDC71LQ8N9Z2 235 aa15.84■□□□□ 0.13
SNF8-216ENST00000573795 OR52E5Q8NH55 327 aa15.84■□□□□ 0.13
SNF8-216ENST00000573795 ZFAND1Q8TCF1 268 aa15.84■□□□□ 0.13
SNF8-216ENST00000573795 MARCH1Q8TCQ1 289 aa15.84■□□□□ 0.13
SNF8-216ENST00000573795 RAB40CQ96S21 281 aa15.84■□□□□ 0.13
SNF8-216ENST00000573795 TRAV30A0A087WSZ9 112 aa15.83■□□□□ 0.12
SNF8-216ENST00000573795 CDS2O95674 445 aa15.83■□□□□ 0.12
SNF8-216ENST00000573795 RND2P52198 227 aa15.83■□□□□ 0.12
SNF8-216ENST00000573795 USF2Q15853 346 aaPredicted RBP15.83■□□□□ 0.12
SNF8-216ENST00000573795 C12orf74Q32Q52 190 aa15.83■□□□□ 0.12
SNF8-216ENST00000573795 PSMG4Q5JS54 123 aa15.83■□□□□ 0.12
SNF8-216ENST00000573795 OR1S2Q8NGQ3 325 aa15.83■□□□□ 0.12
SNF8-216ENST00000573795 NARS2Q96I59 477 aaKnown RBP15.83■□□□□ 0.12
SNF8-216ENST00000573795 NAA50Q9GZZ1 169 aaKnown RBP15.83■□□□□ 0.12
SNF8-216ENST00000573795 TMEM222Q9H0R3 208 aa15.83■□□□□ 0.12
SNF8-216ENST00000573795 EXTL2Q9UBQ6 330 aa15.83■□□□□ 0.12
SNF8-216ENST00000573795 HELTA6NFD8 242 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 SCGB2A1O75556 95 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 NXPH3O95157 252 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 HNRNPCP07910 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
SNF8-216ENST00000573795 OR5AC1P0C628 307 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 HTR2BP41595 481 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 DHODHQ02127 395 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 SCGB2B2Q4G0G5 96 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 C2orf83Q53S99 150 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 ZNF767PQ75MW2 155 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 FAM219AQ8IW50 185 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 TMEM229BQ8NBD8 167 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 RNASE11Q8TAA1 199 aaKnown RBP15.82■□□□□ 0.12
SNF8-216ENST00000573795 GLYATL2Q8WU03 294 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 RNF126Q9BV68 326 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 SCRT1Q9BWW7 348 aa15.82■□□□□ 0.12
SNF8-216ENST00000573795 A0A1B0GVY2 172 aa15.81■□□□□ 0.12
SNF8-216ENST00000573795 RPS10-NUDT3A0A1W2PQS6 291 aa15.81■□□□□ 0.12
SNF8-216ENST00000573795 FAM90A26D6RGX4 464 aa15.81■□□□□ 0.12
SNF8-216ENST00000573795 B3GALNT1O75752 331 aa15.81■□□□□ 0.12
SNF8-216ENST00000573795 AMBPP02760 352 aa15.81■□□□□ 0.12
SNF8-216ENST00000573795 OR10J1P30954 320 aa15.81■□□□□ 0.12
SNF8-216ENST00000573795 YPEL3P61236 119 aaPredicted RBP15.81■□□□□ 0.12
SNF8-216ENST00000573795 MZT2AQ6P582 158 aa15.81■□□□□ 0.12
SNF8-216ENST00000573795 RTBDNQ9BSG5 229 aaPredicted RBP15.81■□□□□ 0.12
SNF8-216ENST00000573795 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.81■□□□□ 0.12
SNF8-216ENST00000573795 RAB3DO95716 219 aa15.8■□□□□ 0.12
SNF8-216ENST00000573795 TAS2R19P59542 299 aa15.8■□□□□ 0.12
SNF8-216ENST00000573795 CTF1Q16619 201 aa15.8■□□□□ 0.12
SNF8-216ENST00000573795 FAAP20Q6NZ36 180 aa15.8■□□□□ 0.12
SNF8-216ENST00000573795 SELENOHQ8IZQ5 122 aaKnown RBP15.8■□□□□ 0.12
SNF8-216ENST00000573795 RNASEH2CQ8TDP1 164 aaKnown RBP15.8■□□□□ 0.12
SNF8-216ENST00000573795 Q8WTZ3 238 aa15.8■□□□□ 0.12
SNF8-216ENST00000573795 GPR146Q96CH1 333 aa15.8■□□□□ 0.12
SNF8-216ENST00000573795 HEYLQ9NQ87 328 aaPredicted RBP15.8■□□□□ 0.12
SNF8-216ENST00000573795 CACNG5Q9UF02 275 aa15.8■□□□□ 0.12
SNF8-216ENST00000573795 SLC25A4P12235 298 aa15.79■□□□□ 0.12
SNF8-216ENST00000573795 EIF2B2P49770 351 aaKnown RBP15.79■□□□□ 0.12
SNF8-216ENST00000573795 STEAP1BQ6NZ63 245 aa15.79■□□□□ 0.12
SNF8-216ENST00000573795 SLC24A4Q8NFF2 622 aa15.79■□□□□ 0.12
SNF8-216ENST00000573795 RBPMSQ93062 196 aaKnown RBP15.79■□□□□ 0.12
SNF8-216ENST00000573795 MIXL1Q9H2W2 232 aa15.79■□□□□ 0.12
SNF8-216ENST00000573795 NAA60Q9H7X0 242 aa15.79■□□□□ 0.12
SNF8-216ENST00000573795 ABCA13Q86UQ4 5058 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 DEFB131BA0A096LNP1 70 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 TEX13DA0A0J9YY54 714 aaPredicted RBP15.78■□□□□ 0.12
SNF8-216ENST00000573795 H3BMM0 161 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 BUB3O43684 328 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 GABARAPO95166 117 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 IL4P05112 153 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 ZNF182P17025 639 aaPredicted RBP15.78■□□□□ 0.12
SNF8-216ENST00000573795 AP2S1P53680 142 aaPredicted RBP15.78■□□□□ 0.12
SNF8-216ENST00000573795 MEF2DQ14814 521 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 LINC00336Q6ZUF6 198 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 AP3S1Q92572 193 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 NRN1Q9NPD7 142 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 XCL2Q9UBD3 114 aa15.78■□□□□ 0.12
SNF8-216ENST00000573795 NPIPB3Q92617 1050 aa15.77■□□□□ 0.12
SNF8-216ENST00000573795 SEPSECSQ9HD40 501 aaKnown RBP15.77■□□□□ 0.12
SNF8-216ENST00000573795 GABARAPH6UMI1 98 aa15.76■□□□□ 0.11
SNF8-216ENST00000573795 TOMM40O96008 361 aa15.76■□□□□ 0.11
SNF8-216ENST00000573795 TMEM268Q5VZI3 342 aa15.76■□□□□ 0.11
SNF8-216ENST00000573795 SIGLEC15Q6ZMC9 328 aa15.76■□□□□ 0.11
SNF8-216ENST00000573795 CRYM-AS1A6NIL9 109 aa15.75■□□□□ 0.11
SNF8-216ENST00000573795 CEBPZOSA8MTT3 80 aa15.75■□□□□ 0.11
SNF8-216ENST00000573795 HLA-DRB4P13762 266 aa15.75■□□□□ 0.11
SNF8-216ENST00000573795 NPY1RP25929 384 aa15.75■□□□□ 0.11
SNF8-216ENST00000573795 DEFB1P60022 68 aa15.75■□□□□ 0.11
SNF8-216ENST00000573795 SNRPD3P62318 126 aaKnown RBP15.75■□□□□ 0.11
SNF8-216ENST00000573795 NMSQ5H8A3 153 aa15.75■□□□□ 0.11
SNF8-216ENST00000573795 GPR107Q5VW38 600 aa15.75■□□□□ 0.11
SNF8-216ENST00000573795 CENPSQ8N2Z9 138 aa15.75■□□□□ 0.11
SNF8-216ENST00000573795 C1QTNF4Q9BXJ3 329 aa15.75■□□□□ 0.11
SNF8-216ENST00000573795 C14orf166Q9Y224 244 aaKnown RBP15.75■□□□□ 0.11
SNF8-216ENST00000573795 HLA-DRB4X5D2U9 266 aa15.75■□□□□ 0.11
SNF8-216ENST00000573795 SURF2Q15527 256 aaPredicted RBP15.74■□□□□ 0.11
SNF8-216ENST00000573795 GDF5OSQ5U4N7 250 aa15.74■□□□□ 0.11
SNF8-216ENST00000573795 ZNF705AQ6ZN79 300 aaPredicted RBP15.74■□□□□ 0.11
SNF8-216ENST00000573795 POM121L12Q8N7R1 296 aa15.74■□□□□ 0.11
SNF8-216ENST00000573795 C15orf40Q8WUR7 153 aa15.74■□□□□ 0.11
SNF8-216ENST00000573795 ACY3Q96HD9 319 aa15.74■□□□□ 0.11
SNF8-216ENST00000573795 GPR132Q9UNW8 380 aa15.74■□□□□ 0.11
SNF8-216ENST00000573795 TMEM56-RWDD3S4R434 201 aa15.74■□□□□ 0.11
SNF8-216ENST00000573795 RTL8CO15255 209 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms