RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ZNF833PQ6ZTB9 187 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 CTDSP1Q9GZU7 261 aa8.18□□□□□ -1.1
SMG6-213ENST00000573166 STPG3Q8N7X2 389 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 OR51G1Q8NGK1 321 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 OR52E5Q8NH55 327 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 TMEM37Q8WXS4 190 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 RBFOX3A6NFN3 312 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 PAGE4O60829 102 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 CNTFRP26992 372 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 ID1P41134 155 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 SUMO1P63165 101 aaKnown RBP8.17□□□□□ -1.1
SMG6-213ENST00000573166 CYP2G1PQ6ZSU1 146 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 SIGLECL1Q8N7X8 197 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 OR4D5Q8NGN0 318 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 GGACTQ9BVM4 153 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 WDR61Q9GZS3 305 aaKnown RBP8.17□□□□□ -1.1
SMG6-213ENST00000573166 A0A0G2JRQ6 117 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 SEC14L6B5MCN3 397 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 NTF3P20783 257 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 S100A4P26447 101 aaKnown RBP8.17□□□□□ -1.1
SMG6-213ENST00000573166 PNRC1Q12796 327 aaPredicted RBP8.17□□□□□ -1.1
SMG6-213ENST00000573166 TMEM241Q24JQ0 296 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 GATAD1Q8WUU5 269 aa8.17□□□□□ -1.1
SMG6-213ENST00000573166 C11orf94C9JXX5 98 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 IGHV4-38-2P0DP08 117 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 HOXB4P17483 251 aaPredicted RBP8.16□□□□□ -1.1
SMG6-213ENST00000573166 RPL7P18124 248 aaKnown RBP8.16□□□□□ -1.1
SMG6-213ENST00000573166 RAB5AP20339 215 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 GATA2P23769 480 aaPredicted RBP8.16□□□□□ -1.1
SMG6-213ENST00000573166 LMO4P61968 165 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 DEFB112Q30KQ8 113 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 C11orf71Q6IPW1 123 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 PQLC2Q6ZP29 291 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 SSX7Q7RTT5 188 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 WFDC11Q8NEX6 87 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 RAB24Q969Q5 203 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 ELOA3CA0A087WX78 387 aaPredicted RBP8.16□□□□□ -1.1
SMG6-213ENST00000573166 J3KRW8 73 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 C15orf32Q32M92 178 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 ZNF562Q6V9R5 426 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 Q6ZRM9 215 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 TMEM144Q7Z5S9 345 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 OR1P1Q8NH06 330 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 CHRDL1Q9BU40 450 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 TNCP24821 2201 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 CLN5O75503 358 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 FAM157CP0CG43 387 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 CD69Q07108 199 aa8.16□□□□□ -1.1
SMG6-213ENST00000573166 CPAMD8Q8IZJ3 1885 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 C8orf88P0DMB2 117 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 GPX4P36969 197 aaPredicted RBP8.15□□□□□ -1.1
SMG6-213ENST00000573166 IQCJQ1A5X6 159 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 RARRES2Q99969 163 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 MANBALQ9NQG1 85 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 IGHV3-66A0A0C4DH42 116 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 CENPVL3A0A0U1RRI6 287 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 LINC00587B1AMM8 73 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 H3BTX0 84 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 AREGP15514 252 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 NSUN5P1Q3KNT7 163 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 AARDQ4LEZ3 155 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 IGFBPL1Q8WX77 278 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 NPCDR1Q9BY65 106 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 CDC42EP3Q9UKI2 254 aa8.15□□□□□ -1.1
SMG6-213ENST00000573166 XKRY2A2RUG3 117 aa8.15□□□□□ -1.11
SMG6-213ENST00000573166 C9JQL5 133 aa8.15□□□□□ -1.11
SMG6-213ENST00000573166 IL6RP08887 468 aaPredicted RBP8.15□□□□□ -1.11
SMG6-213ENST00000573166 RAB9AP51151 201 aa8.15□□□□□ -1.11
SMG6-213ENST00000573166 TEX38Q6PEX7 206 aa8.15□□□□□ -1.11
SMG6-213ENST00000573166 LRRC75A-AS1Q8N1F1 130 aa8.15□□□□□ -1.11
SMG6-213ENST00000573166 OR11H6Q8NGC7 330 aa8.15□□□□□ -1.11
SMG6-213ENST00000573166 AGMATQ9BSE5 352 aa8.15□□□□□ -1.11
SMG6-213ENST00000573166 HOXA3O43365 443 aaPredicted RBP8.14□□□□□ -1.11
SMG6-213ENST00000573166 LINC00469Q8N7U9 141 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 ELOVL1Q9BW60 279 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 PRO1933Q9H354 126 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 DSPP15924 2871 aaKnown RBP8.14□□□□□ -1.11
SMG6-213ENST00000573166 IGHV4-59P01825 116 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 GNG4P50150 75 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 SULT1A2P50226 295 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 TM4SF20Q53R12 229 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 LINC00305Q7Z4B0 112 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 NAGKQ9UJ70 344 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 HTN1P15515 57 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 ERVFC1-1P60608 527 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 LOXL1Q08397 574 aaPredicted RBP8.14□□□□□ -1.11
SMG6-213ENST00000573166 FAM209BQ5JX69 171 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 CENPEQ02224 2701 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 HIST1H1EP10412 219 aaKnown RBP8.14□□□□□ -1.11
SMG6-213ENST00000573166 ZNF343Q6P1L6 599 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 EIF4E3Q8N5X7 224 aaKnown RBP8.14□□□□□ -1.11
SMG6-213ENST00000573166 KLHDC1Q8N7A1 406 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 TBX15Q96SF7 602 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 RPRMQ9NS64 109 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 VAX2Q9UIW0 290 aa8.14□□□□□ -1.11
SMG6-213ENST00000573166 ANKRD17O75179 2603 aaKnown RBP8.13□□□□□ -1.11
SMG6-213ENST00000573166 FCN1O00602 326 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 ATP6V0E1O15342 81 aa8.13□□□□□ -1.11
SMG6-213ENST00000573166 FAM162BQ5T6X4 162 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms