RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 SVEP1Q4LDE5 3571 aa8.19□□□□□ -1.1
USP43-203ENST00000570827 A0A087X0K7 114 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 TRBV9A0A0B4J1U6 114 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 GAGE10A6NGK3 116 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 KLK10O43240 276 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 PSG1P11464 419 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 ARL3P36405 182 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 SUB1P53999 127 aaKnown RBP eCLIP8.18□□□□□ -1.1
USP43-203ENST00000570827 KLF3P57682 345 aaPredicted RBP8.18□□□□□ -1.1
USP43-203ENST00000570827 NRN1LQ496H8 165 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 TMEM136Q6ZRR5 245 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 FAM214BQ7L5A3 538 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 NIT1Q86X76 327 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 OR52E5Q8NH55 327 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 HILPDAQ9Y5L2 63 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 ZNF891A8MT65 544 aaPredicted RBP8.18□□□□□ -1.1
USP43-203ENST00000570827 IGLL1P15814 213 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 ZNF134P52741 427 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 BRWD1-AS2P59051 145 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 TNFAIP6P98066 277 aaPredicted RBP8.18□□□□□ -1.1
USP43-203ENST00000570827 COX19Q49B96 90 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 AARDQ4LEZ3 155 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 SNRNP40Q96DI7 357 aaKnown RBP8.18□□□□□ -1.1
USP43-203ENST00000570827 RAB9BQ9NP90 201 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 KIAA1549Q9HCM3 1950 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 IZUMO1RA6ND01 250 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 GGTLC3B5MD39 225 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 NPIPB11E5RHQ5 1161 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 CNIH1O95406 144 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 TDGF1P13385 188 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 UBE2V1Q13404 147 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 INO80CQ6PI98 192 aaPredicted RBP8.18□□□□□ -1.1
USP43-203ENST00000570827 NUDT10Q8NFP7 164 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 NUDT11Q96G61 164 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 F11RQ9Y624 299 aaKnown RBP8.18□□□□□ -1.1
USP43-203ENST00000570827 DYSFO75923 2080 aa8.18□□□□□ -1.1
USP43-203ENST00000570827 FAM181BA6NEQ2 426 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 M0R296 226 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 SLC25A17O43808 307 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 IGKV1-16P04430 117 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 CT45A6P0DMU7 189 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 CT45A5P0DMU8 189 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 CT45A7P0DMV0 189 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 DLX1P56177 255 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 CT45A1Q5HYN5 189 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 Q5PR19 223 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 DUX4L9Q6RFH8 374 aaPredicted RBP8.17□□□□□ -1.1
USP43-203ENST00000570827 LINC00305Q7Z4B0 112 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 S100A7AQ86SG5 101 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 RPRMLQ8N4K4 120 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 CT45A3Q8NHU0 189 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 C18orf32Q8TCD1 76 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 OSTCQ9NRP0 149 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 SPRR3Q9UBC9 169 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 JPT1Q9UK76 154 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 LSM4Q9Y4Z0 139 aaKnown RBP8.17□□□□□ -1.1
USP43-203ENST00000570827 OR2T8A6NH00 312 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 C15orf61A6NNL5 157 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 PEX7O00628 323 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 NMUP48645 174 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 PPOXP50336 477 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 SCGB2A2Q13296 93 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 SAPCD1Q5SSQ6 148 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 UTF1Q5T230 341 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 CENPVQ7Z7K6 275 aaPredicted RBP8.17□□□□□ -1.1
USP43-203ENST00000570827 BPIFA4PQ86YQ2 179 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 NUP35Q8NFH5 326 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 RAB1CQ92928 201 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 CHRDL1Q9BU40 450 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 S4R3C0 116 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 NAV3Q8IVL0 2385 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 TRAV8-1A0A0A6YYK1 113 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 IQCF6A8MYZ5 107 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 Q0VG73 95 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 MRPS18CQ9Y3D5 142 aaKnown RBP8.17□□□□□ -1.1
USP43-203ENST00000570827 COX11Q9Y6N1 276 aa8.17□□□□□ -1.1
USP43-203ENST00000570827 A0A1W2PNU3 283 aaPredicted RBP8.16□□□□□ -1.1
USP43-203ENST00000570827 OR10J3Q5JRS4 329 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 FNDC4Q9H6D8 234 aaPredicted RBP8.16□□□□□ -1.1
USP43-203ENST00000570827 CEP192Q8TEP8 1941 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 HCFC1P51610 2035 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 A8MWL6 223 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 KIR2DS2P43631 304 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 OR1L8Q8NGR8 309 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 ARHGAP32A7KAX9 2087 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 NTN3O00634 580 aaPredicted RBP8.16□□□□□ -1.1
USP43-203ENST00000570827 AREGP15514 252 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 CCL3L1P16619 93 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 ERVK11-1P61568 191 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 SELENOTP62341 195 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 KRTAP27-1Q3LI81 207 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 SRSF12Q8WXF0 261 aaKnown RBP8.16□□□□□ -1.1
USP43-203ENST00000570827 IFI27L2Q9H2X8 130 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 TNFRSF19Q9NS68 423 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 PPP1R14DQ9NXH3 145 aa8.16□□□□□ -1.1
USP43-203ENST00000570827 C9JCJ5 164 aa8.15□□□□□ -1.1
USP43-203ENST00000570827 SAA1P0DJI8 122 aaPredicted RBP8.15□□□□□ -1.1
USP43-203ENST00000570827 VDAC2P45880 294 aaPredicted RBP8.15□□□□□ -1.1
USP43-203ENST00000570827 MORN5Q5VZ52 161 aa8.15□□□□□ -1.1
USP43-203ENST00000570827 LINC00173Q6ZV60 143 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms